Gene
RNA
| Item | Value |
|---|---|
| gene id | G1786646 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20082386 ~ 20082662 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2045273 | True | 241 | lncRNA | 0.41 | 2 | 20082386 | 20082662 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943631 | NA | coding | downstream | 292463 | 19788794 ~ 19789923 (-) |
| LOC110501577 | LOC106581859 | coding | downstream | 294861 | 19769408 ~ 19787525 (-) |
| vil1 | vil1 | coding | downstream | 318526 | 19743720 ~ 19763860 (-) |
| znf142 | znf142 | coding | downstream | 416185 | 19655763 ~ 19666201 (-) |
| LOC110501567 | usp37 | coding | downstream | 478828 | 19572445 ~ 19603558 (-) |
| agr1 | LOC106581734 | coding | upstream | 113050 | 20195712 ~ 20203864 (-) |
| hdac4 | hdac4 | coding | upstream | 296803 | 20379465 ~ 20660978 (-) |
| LOC118943627 | NA | coding | upstream | 607854 | 20690516 ~ 20692314 (-) |
| LOC110501586 | LOC106581869 | coding | upstream | 648248 | 20730910 ~ 20739954 (-) |
| LOC100136257 | LOC100136257 | coding | upstream | 683250 | 20765912 ~ 20777157 (-) |
| G1786579 | NA | non-coding | downstream | 93098 | 19988868 ~ 19989288 (-) |
| G1786566 | NA | non-coding | downstream | 107825 | 19974320 ~ 19974561 (-) |
| G1786380 | NA | non-coding | downstream | 393980 | 19687765 ~ 19688406 (-) |
| G1786379 | NA | non-coding | downstream | 395217 | 19686490 ~ 19687169 (-) |
| G1785861 | NA | non-coding | downstream | 591653 | 19490519 ~ 19490733 (-) |
| G1786654 | LOC107662719 | non-coding | upstream | 8019 | 20090681 ~ 20091112 (-) |
| G1786709 | NA | non-coding | upstream | 72801 | 20155463 ~ 20183323 (-) |
| G1786720 | NA | non-coding | upstream | 89177 | 20171839 ~ 20175644 (-) |
| G1786733 | NA | non-coding | upstream | 107860 | 20190522 ~ 20190787 (-) |
| G1786737 | NA | non-coding | upstream | 110380 | 20193042 ~ 20193459 (-) |
| G1785753 | NA | other | downstream | 760527 | 19321188 ~ 19321859 (-) |
| LOC110501547 | LOC106586143 | other | downstream | 903202 | 19175567 ~ 19179266 (-) |
| G1783895 | LOC106581829 | other | downstream | 2178435 | 17869529 ~ 17903951 (-) |
| LOC110501514 | dapl1 | other | downstream | 3018938 | 17057104 ~ 17063550 (-) |
| G1786832 | LOC100136012 | other | upstream | 263037 | 20345699 ~ 20346014 (-) |
| G1787166 | NA | other | upstream | 307854 | 20390516 ~ 20455983 (-) |
| LOC110501594 | LOC106581696 | other | upstream | 1708094 | 21788428 ~ 21913721 (-) |
| G1789581 | NA | other | upstream | 2335468 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 3081819 | 23164481 ~ 23169363 (-) |
