G1786751


Basic Information

Item Value
gene id G1786751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 20220206 ~ 20221073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2045388
TCTGGCACTTTGGTCTTCTCCTCCCCCTGTttgtgtctggtctctctcgccttctccctttctcccttctctcGCCGTTTATCCCTGTCTCCATCTTCCTCCCTATTtcggtctctcgctctgtgtgtctccttGTCTTTGCTCTTCTCTCCgcctctgtccttctccctctccttgtctCGTTCCccgtctttctctcttctcttgtctTTGTCCCTCTCTCGGTCCCGGCTCTTGTCCTTGTCGCGGTCTTTGGTCCGGTCTCGTTCGCGGGCCTTCTCCGACCGCTCTCCCTTGGGGTGGGGCTCCTTCTCCTTGTTGCCTCGCCTGTCCTCCTGCTCTTTGGGCTGGTCCGGGTCCTTCTTCTCCCGGCCTCCACCGACGCTGTGCTCTCGTATCTCCTTCCTCTcCTCTCGGTCTCTGTGGCGCTCTCGTCCCT
>TU2045387
TTTTACTGGGCTCCTCTGGATGTGGTCGGTGTTTTGACTCCTCTGACGCTCTggcCTTTTTGTCCCCTTTCTCTGGCACTTTGGTCTTCTCCTCCCCCTGTttgtgtctggtctctctcgccttctccctttctcccttctctcGCCGTTTATCCCTGTCTCCATCTTCCTCCCTATTtcggtctctcgctctgtgtgtctccttGTCTTTGCTCTTCTCTCCgcctctgtccttctccctctccttgtctCGTTCCccgtctttctctcttctcttgtctTTGTCCCTCTCTCGGTCCCGGCTCTTGTCCTTGTCGCGGTCTTTGGTCCGGTCTCGTTCGCGGGCCTTCTCCGACCGCTCTCCCTTGGGGTGGGGCTCCTTCTCCTTGTTGCCTCGCCTGTCCTCCTGCTCTTTGGGCTGGTCCGGGTCCTTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2045388 False 439 lncRNA 0.59 2 20220206 20220908
TU2045387 True 435 lncRNA 0.57 2 20220545 20221073

Neighbor

gene id symbol gene type direction distance location
agr1 LOC106581734 coding downstream 16342 20195712 ~ 20203864 (-)
LOC118943631 NA coding downstream 430283 19788794 ~ 19789923 (-)
LOC110501577 LOC106581859 coding downstream 432681 19769408 ~ 19787525 (-)
vil1 vil1 coding downstream 456346 19743720 ~ 19763860 (-)
znf142 znf142 coding downstream 554005 19655763 ~ 19666201 (-)
hdac4 hdac4 coding upstream 158392 20379465 ~ 20660978 (-)
LOC118943627 NA coding upstream 469443 20690516 ~ 20692314 (-)
LOC110501586 LOC106581869 coding upstream 509837 20730910 ~ 20739954 (-)
LOC100136257 LOC100136257 coding upstream 544839 20765912 ~ 20777157 (-)
LOC110501587 LOC106586113 coding upstream 922011 21143084 ~ 21447203 (-)
G1786737 NA non-coding downstream 26747 20193042 ~ 20193459 (-)
G1786733 NA non-coding downstream 29419 20190522 ~ 20190787 (-)
G1786709 NA non-coding downstream 36883 20155463 ~ 20183323 (-)
G1786720 NA non-coding downstream 44562 20171839 ~ 20175644 (-)
G1786654 LOC107662719 non-coding downstream 129094 20090681 ~ 20091112 (-)
G1786777 NA non-coding upstream 43574 20264647 ~ 20265233 (-)
G1786781 NA non-coding upstream 46489 20267562 ~ 20267764 (-)
G1786788 NA non-coding upstream 60086 20281159 ~ 20281832 (-)
G1786789 NA non-coding upstream 62040 20283113 ~ 20283322 (-)
G1786790 NA non-coding upstream 63522 20284595 ~ 20284840 (-)
G1785753 NA other downstream 898347 19321188 ~ 19321859 (-)
LOC110501547 LOC106586143 other downstream 1041022 19175567 ~ 19179266 (-)
G1783895 LOC106581829 other downstream 2316255 17869529 ~ 17903951 (-)
LOC110501514 dapl1 other downstream 3156758 17057104 ~ 17063550 (-)
G1786832 LOC100136012 other upstream 124626 20345699 ~ 20346014 (-)
G1787166 NA other upstream 169443 20390516 ~ 20455983 (-)
LOC110501594 LOC106581696 other upstream 1569683 21788428 ~ 21913721 (-)
G1789581 NA other upstream 2197057 22418130 ~ 22419498 (-)
G1790280 NA other upstream 2943408 23164481 ~ 23169363 (-)

Expression


Co-expression Network