G1786777


Basic Information

Item Value
gene id G1786777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 20264647 ~ 20265233 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2045414
gtaacaaagtttattactagaacagggggcaggcaaaacgacaaGTGAAGGGCagacagaggtcagtaatccagatcagagtcaataatgtacagaacggcaggctcagggtaatGGTAggtagaatggtcaaaaccgggaaaactagaaaacaggaactagaacaAAACAGGAGCAAGGCgaaaccgctggtaggcttgacgagcaaaacaaactggcaacagacaaatagaacacaggtataaatatacTGGGTATAATGGGGAatatgggtgacacctggaggcgggtggagacaagcacaaagacaagtgaaaaagatcagggtgtgacacagtgGAGTTGTCATAATACcaataaaacctagcggtcaaacagggaaatggttccaatagtttttccaccattcatttttcccataggggattttagaaacatttaaaataagggctgtgtttcatgtaggcttaccctggcgtgacatttGGATAACCATgcaaatctctctcggacaaggtgacttatcaatatattcggTTCCATTTGCTCTCGAAAATGCAAATTTGCATCATGCAAAAGTACAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2045414 True 587 lncRNA 0.42 1 20264647 20265233

Neighbor

gene id symbol gene type direction distance location
agr1 LOC106581734 coding downstream 60783 20195712 ~ 20203864 (-)
LOC118943631 NA coding downstream 474724 19788794 ~ 19789923 (-)
LOC110501577 LOC106581859 coding downstream 477122 19769408 ~ 19787525 (-)
vil1 vil1 coding downstream 500787 19743720 ~ 19763860 (-)
znf142 znf142 coding downstream 598446 19655763 ~ 19666201 (-)
hdac4 hdac4 coding upstream 114232 20379465 ~ 20660978 (-)
LOC118943627 NA coding upstream 425283 20690516 ~ 20692314 (-)
LOC110501586 LOC106581869 coding upstream 465677 20730910 ~ 20739954 (-)
LOC100136257 LOC100136257 coding upstream 500679 20765912 ~ 20777157 (-)
LOC110501587 LOC106586113 coding upstream 877851 21143084 ~ 21447203 (-)
G1786751 NA non-coding downstream 43574 20220206 ~ 20221073 (-)
G1786737 NA non-coding downstream 71188 20193042 ~ 20193459 (-)
G1786733 NA non-coding downstream 73860 20190522 ~ 20190787 (-)
G1786709 NA non-coding downstream 81324 20155463 ~ 20183323 (-)
G1786720 NA non-coding downstream 89003 20171839 ~ 20175644 (-)
G1786781 NA non-coding upstream 2329 20267562 ~ 20267764 (-)
G1786788 NA non-coding upstream 15926 20281159 ~ 20281832 (-)
G1786789 NA non-coding upstream 17880 20283113 ~ 20283322 (-)
G1786790 NA non-coding upstream 19362 20284595 ~ 20284840 (-)
G1786792 NA non-coding upstream 21633 20286866 ~ 20287069 (-)
G1785753 NA other downstream 942788 19321188 ~ 19321859 (-)
LOC110501547 LOC106586143 other downstream 1085463 19175567 ~ 19179266 (-)
G1783895 LOC106581829 other downstream 2360696 17869529 ~ 17903951 (-)
LOC110501514 dapl1 other downstream 3201199 17057104 ~ 17063550 (-)
G1786832 LOC100136012 other upstream 80466 20345699 ~ 20346014 (-)
G1787166 NA other upstream 125283 20390516 ~ 20455983 (-)
LOC110501594 LOC106581696 other upstream 1525523 21788428 ~ 21913721 (-)
G1789581 NA other upstream 2152897 22418130 ~ 22419498 (-)
G1790280 NA other upstream 2899248 23164481 ~ 23169363 (-)

Expression


Co-expression Network