G1786330


Basic Information

Item Value
gene id G1786330
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 20283181 ~ 20284571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2044940
gtggccggtgattttaatgaaggaaaactgaaatccgatttacctaatttctaccagcatgtcacctgtgcaactacaGGGGGGGAAAAACTCtacaccacctttactccacacacagagacacatatgaagttctccctcgccctccatttgtcaaatctgaccataatgctatcctcctgattccagcttacaagcaaaaactcaaacaggaagcaccagtgacacgcttaatacggaagtggtccgatgaagtggatgctaactacgtgactgttttgctagcatactgtagactggaatatattccggcattcatccgatggcattgaggagtttaccacaatgccattgtccccacagtgacagtacatacatatcccaatcagaagccatggattacaggcaacatccgcattgagctaaaggctagagctgccgccttcaaggagcaggacactaatccgggcgcttataagaaatcccgctatgctctccgatgaaccatcaaacaggcaaagcatcaatacagggcagagatcaaatcctactacacctgctttgatgcttgtcggatgtgacagggcttgcaaactatcacgaaTTACAAAACTAAACCCAGCCGAGAGCTgaccagtgacgcaagcctaccagacgagctaaatgccttctatgttcgcttcgaatctagcaacactgaaccatgcctGAGAGCGCCAGCTGTTTCGGGTGACtgtatgatcacgctctccgtagccgatgtgagtaagaccttcaaacaggtgGCCATTCACAAGGTGGATTACCGGTACGcgtactccgagcatgtgctggCCAGCTGGCAAGactcttcactgacattttcaacctctccctgaccctgcctgtctgtaatacctacatgcagactaccatagtccctgtgcccaagaaggccatggtaacctgtctaaatgactacctcCCCGTAGAACTCAcacctgtagccatgaaatgttttgaaaggctggtcatggctcacatcaacaccatcatcccagaaaccctggaccaaccctaatttgcataatgcccaaccagatccacagatgatgcgatctcttgcactccacactgccctctcccacctggacaaaaggaagacATACCTACGCAAGAATGCTGTTGACtgcattgactacagctcagctttcaacaccatagtgccctccaagctcatcactaagctaaggtccctgggactgaacacctccctctgcaactggatcctggacttcctgacgggcagccccccaggtggtgagggtaggcaacaacacatctgccacactgaccctcaacacggggcccctcaggggtgcgtgcttagtcccctcctgtactctgttcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2044940 True 1391 TUCP 0.50 1 20283181 20284571

Neighbor

gene id symbol gene type direction distance location
asb1 asb1 coding upstream 1329 20269646 ~ 20281952 (+)
traf3ip1 traf3ip1 coding upstream 23908 20206402 ~ 20259273 (+)
adarb1b LOC106581860 coding upstream 107521 19997839 ~ 20175660 (+)
LOC110502116 NA coding upstream 410484 19872147 ~ 19872697 (+)
zgc:66484 LOC106581857 coding upstream 539232 19734287 ~ 19743949 (+)
LOC110502064 LOC106581735 coding downstream 53557 20338128 ~ 20343956 (+)
twist2 twist2 coding downstream 75069 20359640 ~ 20365532 (+)
LOC110502066 NA coding downstream 659353 20943924 ~ 20945171 (+)
LOC110501589 LOC106581698 coding downstream 1343973 21628544 ~ 21667403 (+)
LOC110501590 LOC106581697 coding downstream 1384945 21669516 ~ 21701293 (+)
G1786329 NA non-coding upstream 761 20282198 ~ 20282420 (+)
G1786321 NA non-coding upstream 18068 20264499 ~ 20265113 (+)
G1786282 NA non-coding upstream 95380 20187583 ~ 20187801 (+)
G1786280 NA non-coding upstream 99015 20183899 ~ 20184166 (+)
G1786331 NA non-coding downstream 3154 20287725 ~ 20288393 (+)
G1786343 NA non-coding downstream 32908 20317479 ~ 20318069 (+)
G1786354 NA non-coding downstream 60229 20344800 ~ 20345227 (+)
G1786870 NA non-coding downstream 104880 20389451 ~ 20456014 (+)
G1786866 NA non-coding downstream 114629 20399200 ~ 20401362 (+)
G1785947 znf142 other upstream 621255 19661109 ~ 19661926 (+)
LOC110501568 cnot9 other upstream 655421 19603742 ~ 19627954 (+)
ybey ybey other upstream 710742 19570580 ~ 19572946 (+)
LOC110501548 LOC106586143 other upstream 1085467 19186076 ~ 19197714 (+)
G1787719 NA other downstream 849694 21134265 ~ 21136477 (+)
G1788811 LOC106581691 other downstream 1710793 21995364 ~ 21996093 (+)
G1788815 LOC100136012 other downstream 1713902 21998473 ~ 21999623 (+)
G1790442 LOC106582152 other downstream 3131522 23416093 ~ 23432383 (+)
G1790805 NA other downstream 3833991 24118562 ~ 24119475 (+)

Expression


Co-expression Network