G1786834


Basic Information

Item Value
gene id G1786834
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 20346146 ~ 20346632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2045478
CAAATAGTGTTTCTATCATTTACTTTTATGTGTGCTGTTGTTCCATTATTATTTCAGGTTCAAACCTAAAACATATCAGAAGCCCTGGCCTAACCAATAGGCCTTTTCTTAAAATAAACATAGGCAATTTCTATCATCctgcatatacacatacagtggggagaacaagtatttgatacactgctgattttgcaggttttcctacttacaaagcatgtagaggtcagtaatttgtatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacataattatttgatcacctaccaaccagtaagaattccggctctcacagacctgtacgtttttctttaagaagcccaccTGTtcgaactcgttacctgtataaaagacacctgtccacacactcaatcaaacagactccaacctctccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2045478 True 487 lncRNA 0.36 1 20346146 20346632

Neighbor

gene id symbol gene type direction distance location
agr1 LOC106581734 coding downstream 142282 20195712 ~ 20203864 (-)
LOC118943631 NA coding downstream 556223 19788794 ~ 19789923 (-)
LOC110501577 LOC106581859 coding downstream 558621 19769408 ~ 19787525 (-)
vil1 vil1 coding downstream 582286 19743720 ~ 19763860 (-)
znf142 znf142 coding downstream 679945 19655763 ~ 19666201 (-)
hdac4 hdac4 coding upstream 32833 20379465 ~ 20660978 (-)
LOC118943627 NA coding upstream 343884 20690516 ~ 20692314 (-)
LOC110501586 LOC106581869 coding upstream 384278 20730910 ~ 20739954 (-)
LOC100136257 LOC100136257 coding upstream 419280 20765912 ~ 20777157 (-)
LOC110501587 LOC106586113 coding upstream 796452 21143084 ~ 21447203 (-)
G1786815 NA non-coding downstream 21211 20324712 ~ 20324935 (-)
G1786814 NA non-coding downstream 21655 20324200 ~ 20324491 (-)
G1786804 NA non-coding downstream 43563 20302162 ~ 20302583 (-)
G1786793 NA non-coding downstream 58599 20287193 ~ 20287547 (-)
G1786792 NA non-coding downstream 59077 20286866 ~ 20287069 (-)
G1786846 NA non-coding upstream 7115 20353747 ~ 20354077 (-)
G1787208 NA non-coding upstream 52220 20398852 ~ 20400113 (-)
G1787259 NA non-coding upstream 178141 20524773 ~ 20532999 (-)
G1787982 NA non-coding upstream 751681 21098313 ~ 21122358 (-)
G1788010 NA non-coding upstream 789911 21136543 ~ 21136749 (-)
G1786832 LOC100136012 other downstream 132 20345699 ~ 20346014 (-)
G1785753 NA other downstream 1024287 19321188 ~ 19321859 (-)
LOC110501547 LOC106586143 other downstream 1166962 19175567 ~ 19179266 (-)
G1783895 LOC106581829 other downstream 2442195 17869529 ~ 17903951 (-)
G1787166 NA other upstream 43884 20390516 ~ 20455983 (-)
LOC110501594 LOC106581696 other upstream 1444124 21788428 ~ 21913721 (-)
G1789581 NA other upstream 2071498 22418130 ~ 22419498 (-)
G1790280 NA other upstream 2817849 23164481 ~ 23169363 (-)
LOC110501997 LOC106582152 other upstream 3086362 23368423 ~ 23460589 (-)

Expression


Co-expression Network