XLOC_003713 (CU929458.1)


Basic Information

Item Value
gene id XLOC_003713
gene name CU929458.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 43363075 ~ 43368382 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007186
aaataattttaatactattattatttgcagttattttcaatatattccatatatatatatatatatatatatgttgtaaatgagggcgatgccaaccctcttgtgcaccaccagagggaaccatcgccagaattctgattcgactcacggactcaaaatcccataagccctgctacctggcactgattacggtccaggtgcaactcatcagctctcgtgtatatataccacactcacgctccggttcgttgcgaagtcttgatttgcctggctgtcatttctgagcgttccatactccctgcttcggactgatctttgtttctgaccctgtgcttgttctacgattacgaaagacatctgcctgcccctgatctccagcctgttattctgaccagtaagatatctgcctgcctttgaacttttgcctgtcccacgttctgtctcctggattgcccctttgtgtttgtttgtatgtgtgctcttaataaagcttgcaaatggattcaatgccttctgactcatcacaacagaagacttcgccactacagaatccagcagctttagcacaagtctcgactgaactttccgctcaagccactcagttagccacccatcatcaacaactcacccatctaacttctctcacggaggaactggtgagagctatgcagcaactccgtcatccgaatcctgcagttaccccgcctgctaccatgacagcttctcaaccaacgcatgtctccaatgctccggctaccgtaagtccccgattagcttttcctgaaaagtttgatgggtcaccttctcgctgcaaaggcttcttattacaatgcaaactatttgttaaccaacaacctgcattatatcccactgattctagtcgggtggcttttgtatgcaacctgttaacggggaaagcgctggaatgggctacagcgatatggaaggaggaggaatgtaactatcccacatttgaaacttttctcaagcaatttcgggaagtgttcgagcacccagcagatgggagaagccccggtgagcagttactttctcttacacaggggcgtaacacagctgcagaatacgccttttcatttcgcactctcgccgctcaaactaactgggttgaggatacactgaagacactattcagacggggtctgaataccaatctacaatctgaattggcttgccgtgacgaaggaaagaaattgaacgaactcattgaacttaccatccgtcttgatcatctgattcgcagccgtagaaatcctcgcacacagctccatgtttcaagtgacacgccccctgatgaacccatgcaactgggtttcacccgtctcacccatgaagaaagaatgcatcgattgcaaaatcatctatgcctgtactgcggtcaatcagggcacaggaaatccacctgcagcgtgcgacctcagacaccagttcaattggtgagtccttcccatgttcctgcacttttcagtgtactgattcctgtgattattaaatttgataaaagaatgattaatactacggctcttgtcgactctggatctgccggaaactttatatctaagaaatttgctttatgtcacgaactatctctcagctcatatgattcctgtcttgcagtggaagcactagacggtcgtcctgtgggtgaaggacgcatccgtatgattacgaataagctacagttacaagttggtgttctacacattgaagaaatgcaattctacattattgattcagttaatcatccactggtgttgggactgccctggttaaggcgacatgatcctcatatctcctggagggacggacagatattgcagtggagtgagtcatgcatgaaacagtgcatccagcccattcacaaaattccattacgaaccaccaatgtgttacctgaactcgttgatgaactaatccccattgagtaccatgacttacatgaagcttttagcaaacaaaaagctactcaacttcccccacatcgaccaagtgattgtgctattgagttaattccaggttcaagtcctccaacgggtcgaatattccctctgtcacaacctgagcacaaggcaatgtctgaatatatcgacgaagaattggccaagggtttcatccgaccttctacatctcctgcttcagctggattcttctttgtaaagaagaaagatggcagtttacgtccctgtattgattaccgagggctcaatgaaatcaccgtaaaattccgctatccattacccctcgtacctcctgccctggaacaattaagaaaggctagatattataccaagcttgatcttcgcagtgcatataaccttgtcagaatccgtgctggtgacgagtggaagaccgcgttttccaccactagggggcactatgagtacacggtaatgcccttcggcctgtcaaactgtccatccgtgttccaatcttttatgaacgatgtctttcgggatatgctggatcgctgggtcatcatttacatcgacgacatcctcatatattcaaacacgatgaaggaacatgttgaacatgtacgtatagtgttgcaacgcatgattcaacatcgtctgtacgccaaattagagaagtgtgaatttcaccagacacagatcgcctttttgggatacgtcatcagtgcagaagggattaccatggatgatacgaaggtacaggcagttcaacgatggccgttaccccagaatctcaaggagttgcagcgatttctaggttttgccaacttctatagacggtttatcagaggctttagttcaatagccgcaccattaacagccatgaccaaacgaaattcccacaaactatcctggtcctctgaagcacgccaagcattttgcgatctgaagactcaattcaccacagctcccattctccgtcatcccaacccagacctacctttcattgtggaagtggatgcatccaacacaggagtcggtgctgtgttatctcaacgtcagggtcaaccatccaaaatgtatccatgtgccttcttctcccgtaaattgaccagcgcagaacgaaactatgatgtgggaaatcgcgaattactggcaatgaaattagccctggaagaatggagacactggctggagggggctagtcagcaattcaccatattaactgaccacaagaatctggaatatcttcgctcagccaaacgtctaaatcccagacaagctcgttgggctttgttcttcaccagattcgacttcattgtcacctatagaccagggagtaaaaatagtaaggcagatgcactatccaggctatcagaggataaaaccccaattagtgatgaaaccattattcctacgaacttactagtggctccagtacagtgggacatacttaccgagatccaagaggccaaccgagaaaacaaccctccagtagactgtccgaatcacctgatttttgtacccaataacatacgtaccagattactgacccatattcatgacactcccagttcggggcatccaggcatcactgcaactttggagttagtcaaagcccgtttctggtggccgtccctcacgaaggatgtaattaattatgttcagaaatgtgaaatttgccaaagcacgaaggcatctcaccaaacccctgctggcctgttacaaccgctaccggttccgcaacggccctggtcccatatagcggtggacttcattacggatctccctgtttcccagaacaacacagtcattctcacggtggttgatcgtttctccaaggcttgtcgcctaataccgttgcccaaattgccctctgcctttgaaaccgcagaagccctgtgcaatcatgtatttcgaatgtttggcttacctgatgatatcgtctcagacaggggatcccaattcacttcccgggtatggtccgctctctgtaaaaatctaaatattaatgttagtctcacctcagggtaccatcctcaatccaacggccaaactgaacgtatgaatcaagaagtcattcgatttctacgttcctactgtcatcagcaacagcacgactggagtcgctatctgatgtgggcagaatatgcacaaaattcattaataaagccagccacgggtatcacgccattcaaatgtattcttggctaccaaccacccctgtttccatggtccggagaacccactgagttacctgctgtcacggattggctgcagcggagtgaggatgtctggaaccaggctcacagacatctcatgagggcagtcaggaggagagagattcaggcgaaccgtcaccgacgccagggacccacgtatcaaccggggcagtgggtgtggttgtcgacacgagaccttcgtctgagattgccctgccgcaaactcagtcccaggtatgtagggccattcaaaattgtacgccagattactccagtgtcttttcgcttagccttgcctaatcattatcgtatttctcctactttccacatgtcattactcaaacccgctggtggtccacgagaggaggcggttgaggaggaatcggaaaccaggacccctccacctgtcatgatcgagggcgaggaagcttacctcgttcgagaagtgctggactctcgacgtcggggtagcgccctccaatatctggtggactgggaagggtacggtccagaggaacggtcctgggtgaatgctagagatattctagacccaactctcacggaagagtttcatcaaaggttcccagagaaaccagccccccgacagcgcggtagaccccggcgtcaggtgccttctcgcttcaggagccgctcgcaggaggggggttctgttgtaaatgagggcgatgccaaccctcttgtgcaccaccagagggaaccatcgccagaattctgattcgactcacggactcaaaatcccataagccctgctacctggcactgattacggtccaggtgcaactcatcagctctcgtgtatatataccacactcacgctccggttcgttgcgaagtcttgatttgcctggctgtcatttctgagcgttccatactccctgcttcggactgatctttgtttctgaccctgtgcttgttctacgattacgaaagacatctgcctgcccctgatctccagcctgttattctgaccagtaagatatctgcctgcctttgaacttttgcctgtcccacgttctgtctcctggattgcccctttgtgtttgtttgtatgtgtgctcttaataaagcttgcaaatggattcaatgccttctgactcatcacaacaatatatatatatgtatatataattttat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114395

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007186 True 5308 mRNA 0.47 1 43363075 43368382

Neighbor

gene id symbol gene type direction distance location
XLOC_003712 CABZ01058277.1 coding upstream 65442 43295275 ~ 43297633 (+)
XLOC_003711 foxg1b coding upstream 246826 43114108 ~ 43116249 (+)
XLOC_003710 CABZ01080006.1 coding upstream 285734 43070883 ~ 43077341 (+)
XLOC_003708 NA coding upstream 315054 43035558 ~ 43048021 (+)
XLOC_003709 CABZ01092982.1 coding upstream 318126 43044826 ~ 43044949 (+)
XLOC_003714 sult6b1 coding downstream 6944 43375326 ~ 43388063 (+)
XLOC_003715 vipb coding downstream 32819 43401201 ~ 43414172 (+)
XLOC_003716 slc29a1b coding downstream 51427 43419809 ~ 43458612 (+)
XLOC_003717 NA coding downstream 164200 43532582 ~ 43535890 (+)
XLOC_003718 CABZ01073015.1 coding downstream 274776 43643158 ~ 43646674 (+)
XLOC_003369 CR854846.2 misc upstream 27239993 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 30651079 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 30668812 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 30677476 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 30683047 12679732 ~ 12680028 (+)
XLOC_003707 NA non-coding upstream 479777 42839850 ~ 42883298 (+)
XLOC_003722 NA non-coding downstream 443247 43811629 ~ 43817356 (+)
XLOC_003723 NA non-coding downstream 453173 43821555 ~ 43822853 (+)
XLOC_003724 NA non-coding downstream 575500 43943882 ~ 43950660 (+)

Expression


Co-expression Network