Gene
RNA
| Item | Value |
|---|---|
| gene id | G1786870 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20389451 ~ 20456014 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2045515 | False | 530 | lncRNA | 0.42 | 2 | 20389451 | 20391109 |
| TU2045517 | True | 398 | lncRNA | 0.43 | 3 | 20389451 | 20456014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| twist2 | twist2 | coding | upstream | 23919 | 20359640 ~ 20365532 (+) |
| LOC110502064 | LOC106581735 | coding | upstream | 45495 | 20338128 ~ 20343956 (+) |
| asb1 | asb1 | coding | upstream | 107599 | 20269646 ~ 20281952 (+) |
| traf3ip1 | traf3ip1 | coding | upstream | 130178 | 20206402 ~ 20259273 (+) |
| adarb1b | LOC106581860 | coding | upstream | 213791 | 19997839 ~ 20175660 (+) |
| LOC110502066 | NA | coding | downstream | 487910 | 20943924 ~ 20945171 (+) |
| LOC110501589 | LOC106581698 | coding | downstream | 1172530 | 21628544 ~ 21667403 (+) |
| LOC110501590 | LOC106581697 | coding | downstream | 1213502 | 21669516 ~ 21701293 (+) |
| c22h2orf69 | cssa21h2orf69 | coding | downstream | 1473348 | 21929362 ~ 21934705 (+) |
| esyt3 | LOC106581688 | coding | downstream | 1579358 | 22035372 ~ 22076238 (+) |
| G1786354 | NA | non-coding | upstream | 44224 | 20344800 ~ 20345227 (+) |
| G1786343 | NA | non-coding | upstream | 71382 | 20317479 ~ 20318069 (+) |
| G1786331 | NA | non-coding | upstream | 101058 | 20287725 ~ 20288393 (+) |
| G1786329 | NA | non-coding | upstream | 107031 | 20282198 ~ 20282420 (+) |
| G1787075 | NA | non-coding | downstream | 221317 | 20677331 ~ 20677534 (+) |
| G1787081 | NA | non-coding | downstream | 227299 | 20683313 ~ 20683528 (+) |
| G1787114 | NA | non-coding | downstream | 290500 | 20746514 ~ 20746913 (+) |
| G1787121 | NA | non-coding | downstream | 299558 | 20755572 ~ 20757681 (+) |
| G1787128 | LOC106581870 | non-coding | downstream | 309898 | 20765912 ~ 20773791 (+) |
| G1786330 | NA | other | upstream | 104880 | 20283181 ~ 20284571 (+) |
| G1785947 | znf142 | other | upstream | 727525 | 19661109 ~ 19661926 (+) |
| LOC110501568 | cnot9 | other | upstream | 761691 | 19603742 ~ 19627954 (+) |
| ybey | ybey | other | upstream | 817012 | 19570580 ~ 19572946 (+) |
| G1787719 | NA | other | downstream | 678251 | 21134265 ~ 21136477 (+) |
| G1788811 | LOC106581691 | other | downstream | 1539350 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 1542459 | 21998473 ~ 21999623 (+) |
| G1790442 | LOC106582152 | other | downstream | 2960079 | 23416093 ~ 23432383 (+) |
| G1790805 | NA | other | downstream | 3662548 | 24118562 ~ 24119475 (+) |
