G1786866


Basic Information

Item Value
gene id G1786866
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 20399200 ~ 20401362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2045510
ctccacctctctgtcaactcactcttccagactctctctttctctccacctctctgtcaactcactgttccagactctctctttctcttcccctctccatctctctgtcaactcactgttccagacgctctctttctctccccctctccatCTCTCTGTCAACTcactgttccagactctctctgtctctccacctctctgtcaactcactgttccagactctctctttctctccacctctccatctctctctgtcaactcactgttccagactctctctttctctccacctctcggtcaactcactgttccagactctctctttctcttcccctctccatctctctgtcaactcactgttccagacgctctctttctctccccctctccatctctgtcaactcactgttccagactctctctttctcttcccctctccatctctctgtcaactcactgttccagacgctctctttctctccccctctccatctctgtcaactcactgttccagactctctctttctctccacctctccatctctctctgtcaactcactgttccactctctctttcactctacctctccatctctctgtcaactcactgttccagactctctctttctctccatctctctctgtcaactcactgttccagactctctctttcgctccacctctccatctctctctgtcaactcactgttccagactctctctttctctccacctctccatctctctctgtcaactcactgttccagactctctctttctctccacctctccatctctctctgtcaactcactgttccagactctctctttctcttcccctctccatctctctgtcaactcactgttccagactctctctttctctctacctctccatctctctgtcaactcactgttctagactctctctttctctccacctctccatctctctctgtcaactcactgttccagggtctctctttctctccacctctctcccttggCGGAAACATTGGGCCAAGGCCCTTTAAGCACCACACCTCTGGCTGAGCCTGTGATTGGACTAAATGTGTAGAGACAGTCTCCCCAAACAGGTGCAGTGGCAAATTATTGACAACAATTATAGAAACCCCTCCCTCATTCTTACCTCGATTCCTAGCAAAGCAGAGACGCAGGCTTCAGAGGCATCGCAGATGGCAGTGAGGTCATGGCCCCCCTCCAGGGCCAGTACCAGGCGTCCCCCGGCCAGCCCCATCAGCTGCCTGGTCAGGTAGCCGAAACCTGGGGACAGGAAATGCCAGAGGTGGGGGTTAGAGTTAGTCTATGGCGACTCTGGCACTTGGACGCTGATCAAAACAAATGCAGACAGAGAgtaaggggaggagggagaaaagggtATTGCATCATATTTTCTCTTTTAGGTTTTAGAAGGAGAAGGTACCAGAGATTTACTGGGGGATAAATGCATAACACGAGACAGATTTAATCTTAATAAATGTGGCTTAGTGTTTTGGCTCGGGCCACCAATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2045510 True 1532 lncRNA 0.50 2 20399200 20401362

Neighbor

gene id symbol gene type direction distance location
twist2 twist2 coding upstream 33668 20359640 ~ 20365532 (+)
LOC110502064 LOC106581735 coding upstream 55244 20338128 ~ 20343956 (+)
asb1 asb1 coding upstream 117348 20269646 ~ 20281952 (+)
traf3ip1 traf3ip1 coding upstream 139927 20206402 ~ 20259273 (+)
adarb1b LOC106581860 coding upstream 223540 19997839 ~ 20175660 (+)
LOC110502066 NA coding downstream 542562 20943924 ~ 20945171 (+)
LOC110501589 LOC106581698 coding downstream 1227182 21628544 ~ 21667403 (+)
LOC110501590 LOC106581697 coding downstream 1268154 21669516 ~ 21701293 (+)
c22h2orf69 cssa21h2orf69 coding downstream 1528000 21929362 ~ 21934705 (+)
esyt3 LOC106581688 coding downstream 1634010 22035372 ~ 22076238 (+)
G1786354 NA non-coding upstream 53973 20344800 ~ 20345227 (+)
G1786343 NA non-coding upstream 81131 20317479 ~ 20318069 (+)
G1786331 NA non-coding upstream 110807 20287725 ~ 20288393 (+)
G1786329 NA non-coding upstream 116780 20282198 ~ 20282420 (+)
G1787075 NA non-coding downstream 275969 20677331 ~ 20677534 (+)
G1787081 NA non-coding downstream 281951 20683313 ~ 20683528 (+)
G1787114 NA non-coding downstream 345152 20746514 ~ 20746913 (+)
G1787121 NA non-coding downstream 354210 20755572 ~ 20757681 (+)
G1787128 LOC106581870 non-coding downstream 364550 20765912 ~ 20773791 (+)
G1786330 NA other upstream 114629 20283181 ~ 20284571 (+)
G1785947 znf142 other upstream 737274 19661109 ~ 19661926 (+)
LOC110501568 cnot9 other upstream 771440 19603742 ~ 19627954 (+)
ybey ybey other upstream 826761 19570580 ~ 19572946 (+)
G1787719 NA other downstream 732903 21134265 ~ 21136477 (+)
G1788811 LOC106581691 other downstream 1594002 21995364 ~ 21996093 (+)
G1788815 LOC100136012 other downstream 1597111 21998473 ~ 21999623 (+)
G1790442 LOC106582152 other downstream 3014731 23416093 ~ 23432383 (+)
G1790805 NA other downstream 3717200 24118562 ~ 24119475 (+)

Expression


Co-expression Network