G1787982


Basic Information

Item Value
gene id G1787982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 21098313 ~ 21122358 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2046704
gtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctctttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcaccgtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2046704 True 424 lncRNA 0.45 2 21098313 21122358

Neighbor

gene id symbol gene type direction distance location
LOC100136257 LOC100136257 coding downstream 321156 20765912 ~ 20777157 (-)
LOC110501586 LOC106581869 coding downstream 358359 20730910 ~ 20739954 (-)
LOC118943627 NA coding downstream 405999 20690516 ~ 20692314 (-)
hdac4 hdac4 coding downstream 437335 20379465 ~ 20660978 (-)
agr1 LOC106581734 coding downstream 894449 20195712 ~ 20203864 (-)
LOC110501587 LOC106586113 coding upstream 20726 21143084 ~ 21447203 (-)
LOC110501588 LOC106581699 coding upstream 450206 21572564 ~ 21590999 (-)
LOC110501591 LOC106581664 coding upstream 586523 21708881 ~ 21766231 (-)
LOC110501594 LOC106581696 coding upstream 666070 21788428 ~ 21913721 (-)
ftcdnl1 LOC106581695 coding upstream 800442 21922800 ~ 21936414 (-)
G1787259 NA non-coding downstream 565314 20524773 ~ 20532999 (-)
G1787208 NA non-coding downstream 698200 20398852 ~ 20400113 (-)
G1786846 NA non-coding downstream 744236 20353747 ~ 20354077 (-)
G1786834 NA non-coding downstream 751681 20346146 ~ 20346632 (-)
G1786815 NA non-coding downstream 773378 20324712 ~ 20324935 (-)
G1788010 NA non-coding upstream 14185 21136543 ~ 21136749 (-)
G1788013 NA non-coding upstream 15971 21138329 ~ 21139127 (-)
G1788014 NA non-coding upstream 18700 21141058 ~ 21141545 (-)
G1788199 NA non-coding upstream 267854 21390212 ~ 21395471 (-)
G1788252 NA non-coding upstream 331056 21453414 ~ 21453619 (-)
G1787166 NA other downstream 642330 20390516 ~ 20455983 (-)
G1786832 LOC100136012 other downstream 752299 20345699 ~ 20346014 (-)
znf142 znf142 other downstream 1439213 19655763 ~ 19666201 (-)
G1785753 NA other downstream 1776454 19321188 ~ 19321859 (-)
LOC110501547 LOC106586143 other downstream 1919129 19175567 ~ 19179266 (-)
G1789581 NA other upstream 1295772 22418130 ~ 22419498 (-)
G1790280 NA other upstream 2042123 23164481 ~ 23169363 (-)
LOC110501997 LOC106582152 other upstream 2310636 23368423 ~ 23460589 (-)
G1791405 NA other upstream 3204371 24326729 ~ 24327127 (-)

Expression


Co-expression Network