Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788199 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21390212 ~ 21395471 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2046927 | True | 232 | lncRNA | 0.44 | 2 | 21390212 | 21395471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136257 | LOC100136257 | coding | downstream | 613055 | 20765912 ~ 20777157 (-) |
| LOC110501586 | LOC106581869 | coding | downstream | 650258 | 20730910 ~ 20739954 (-) |
| LOC118943627 | NA | coding | downstream | 697898 | 20690516 ~ 20692314 (-) |
| hdac4 | hdac4 | coding | downstream | 729234 | 20379465 ~ 20660978 (-) |
| agr1 | LOC106581734 | coding | downstream | 1186348 | 20195712 ~ 20203864 (-) |
| LOC110501588 | LOC106581699 | coding | upstream | 177093 | 21572564 ~ 21590999 (-) |
| LOC110501591 | LOC106581664 | coding | upstream | 313410 | 21708881 ~ 21766231 (-) |
| LOC110501594 | LOC106581696 | coding | upstream | 392957 | 21788428 ~ 21913721 (-) |
| ftcdnl1 | LOC106581695 | coding | upstream | 527329 | 21922800 ~ 21936414 (-) |
| stk17b | LOC106581692 | coding | upstream | 541043 | 21936514 ~ 21957704 (-) |
| G1788014 | NA | non-coding | downstream | 248667 | 21141058 ~ 21141545 (-) |
| G1788013 | NA | non-coding | downstream | 251085 | 21138329 ~ 21139127 (-) |
| G1788010 | NA | non-coding | downstream | 253463 | 21136543 ~ 21136749 (-) |
| G1787982 | NA | non-coding | downstream | 267854 | 21098313 ~ 21122358 (-) |
| G1787259 | NA | non-coding | downstream | 857213 | 20524773 ~ 20532999 (-) |
| G1788252 | NA | non-coding | upstream | 57943 | 21453414 ~ 21453619 (-) |
| G1788266 | NA | non-coding | upstream | 81053 | 21476524 ~ 21476740 (-) |
| G1788277 | NA | non-coding | upstream | 93650 | 21489121 ~ 21489349 (-) |
| G1788278 | NA | non-coding | upstream | 94719 | 21490190 ~ 21490390 (-) |
| G1788496 | NA | non-coding | upstream | 168863 | 21564334 ~ 21564604 (-) |
| G1787166 | NA | other | downstream | 934229 | 20390516 ~ 20455983 (-) |
| G1786832 | LOC100136012 | other | downstream | 1044198 | 20345699 ~ 20346014 (-) |
| znf142 | znf142 | other | downstream | 1731112 | 19655763 ~ 19666201 (-) |
| G1785753 | NA | other | downstream | 2068353 | 19321188 ~ 19321859 (-) |
| LOC110501547 | LOC106586143 | other | downstream | 2211028 | 19175567 ~ 19179266 (-) |
| G1789581 | NA | other | upstream | 1022659 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 1769010 | 23164481 ~ 23169363 (-) |
| LOC110501997 | LOC106582152 | other | upstream | 2037523 | 23368423 ~ 23460589 (-) |
| G1791405 | NA | other | upstream | 2931258 | 24326729 ~ 24327127 (-) |
