Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788252 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21453414 ~ 21453619 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2046980 | True | 206 | lncRNA | 0.50 | 1 | 21453414 | 21453619 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501587 | LOC106586113 | coding | downstream | 6211 | 21143084 ~ 21447203 (-) |
| LOC100136257 | LOC100136257 | coding | downstream | 676257 | 20765912 ~ 20777157 (-) |
| LOC110501586 | LOC106581869 | coding | downstream | 713460 | 20730910 ~ 20739954 (-) |
| LOC118943627 | NA | coding | downstream | 761100 | 20690516 ~ 20692314 (-) |
| hdac4 | hdac4 | coding | downstream | 792436 | 20379465 ~ 20660978 (-) |
| LOC110501588 | LOC106581699 | coding | upstream | 118945 | 21572564 ~ 21590999 (-) |
| LOC110501591 | LOC106581664 | coding | upstream | 255262 | 21708881 ~ 21766231 (-) |
| LOC110501594 | LOC106581696 | coding | upstream | 334809 | 21788428 ~ 21913721 (-) |
| ftcdnl1 | LOC106581695 | coding | upstream | 469181 | 21922800 ~ 21936414 (-) |
| stk17b | LOC106581692 | coding | upstream | 482895 | 21936514 ~ 21957704 (-) |
| G1788199 | NA | non-coding | downstream | 57943 | 21390212 ~ 21395471 (-) |
| G1788014 | NA | non-coding | downstream | 311869 | 21141058 ~ 21141545 (-) |
| G1788013 | NA | non-coding | downstream | 314287 | 21138329 ~ 21139127 (-) |
| G1788010 | NA | non-coding | downstream | 316665 | 21136543 ~ 21136749 (-) |
| G1787982 | NA | non-coding | downstream | 331056 | 21098313 ~ 21122358 (-) |
| G1788266 | NA | non-coding | upstream | 22905 | 21476524 ~ 21476740 (-) |
| G1788277 | NA | non-coding | upstream | 35502 | 21489121 ~ 21489349 (-) |
| G1788278 | NA | non-coding | upstream | 36571 | 21490190 ~ 21490390 (-) |
| G1788496 | NA | non-coding | upstream | 110715 | 21564334 ~ 21564604 (-) |
| G1788570 | NA | non-coding | upstream | 211231 | 21664850 ~ 21668426 (-) |
| G1787166 | NA | other | downstream | 997431 | 20390516 ~ 20455983 (-) |
| G1786832 | LOC100136012 | other | downstream | 1107400 | 20345699 ~ 20346014 (-) |
| znf142 | znf142 | other | downstream | 1794314 | 19655763 ~ 19666201 (-) |
| G1785753 | NA | other | downstream | 2131555 | 19321188 ~ 19321859 (-) |
| LOC110501547 | LOC106586143 | other | downstream | 2274230 | 19175567 ~ 19179266 (-) |
| G1789581 | NA | other | upstream | 964511 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 1710862 | 23164481 ~ 23169363 (-) |
| LOC110501997 | LOC106582152 | other | upstream | 1979375 | 23368423 ~ 23460589 (-) |
| G1791405 | NA | other | upstream | 2873110 | 24326729 ~ 24327127 (-) |
