Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788277 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21489121 ~ 21489349 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2047005 | True | 229 | lncRNA | 0.38 | 1 | 21489121 | 21489349 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501587 | LOC106586113 | coding | downstream | 41918 | 21143084 ~ 21447203 (-) |
| LOC100136257 | LOC100136257 | coding | downstream | 711964 | 20765912 ~ 20777157 (-) |
| LOC110501586 | LOC106581869 | coding | downstream | 749167 | 20730910 ~ 20739954 (-) |
| LOC118943627 | NA | coding | downstream | 796807 | 20690516 ~ 20692314 (-) |
| hdac4 | hdac4 | coding | downstream | 828143 | 20379465 ~ 20660978 (-) |
| LOC110501588 | LOC106581699 | coding | upstream | 83215 | 21572564 ~ 21590999 (-) |
| LOC110501591 | LOC106581664 | coding | upstream | 219532 | 21708881 ~ 21766231 (-) |
| LOC110501594 | LOC106581696 | coding | upstream | 299079 | 21788428 ~ 21913721 (-) |
| ftcdnl1 | LOC106581695 | coding | upstream | 433451 | 21922800 ~ 21936414 (-) |
| stk17b | LOC106581692 | coding | upstream | 447165 | 21936514 ~ 21957704 (-) |
| G1788266 | NA | non-coding | downstream | 12381 | 21476524 ~ 21476740 (-) |
| G1788252 | NA | non-coding | downstream | 35502 | 21453414 ~ 21453619 (-) |
| G1788199 | NA | non-coding | downstream | 93650 | 21390212 ~ 21395471 (-) |
| G1788014 | NA | non-coding | downstream | 347576 | 21141058 ~ 21141545 (-) |
| G1788013 | NA | non-coding | downstream | 349994 | 21138329 ~ 21139127 (-) |
| G1788278 | NA | non-coding | upstream | 841 | 21490190 ~ 21490390 (-) |
| G1788496 | NA | non-coding | upstream | 74985 | 21564334 ~ 21564604 (-) |
| G1788570 | NA | non-coding | upstream | 175501 | 21664850 ~ 21668426 (-) |
| G1788661 | NA | non-coding | upstream | 288443 | 21777792 ~ 21778222 (-) |
| G1788664 | NA | non-coding | upstream | 292092 | 21781441 ~ 21781669 (-) |
| G1787166 | NA | other | downstream | 1033138 | 20390516 ~ 20455983 (-) |
| G1786832 | LOC100136012 | other | downstream | 1143107 | 20345699 ~ 20346014 (-) |
| znf142 | znf142 | other | downstream | 1830021 | 19655763 ~ 19666201 (-) |
| G1785753 | NA | other | downstream | 2167262 | 19321188 ~ 19321859 (-) |
| LOC110501547 | LOC106586143 | other | downstream | 2309937 | 19175567 ~ 19179266 (-) |
| G1789581 | NA | other | upstream | 928781 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 1675132 | 23164481 ~ 23169363 (-) |
| LOC110501997 | LOC106582152 | other | upstream | 1943645 | 23368423 ~ 23460589 (-) |
| G1791405 | NA | other | upstream | 2837380 | 24326729 ~ 24327127 (-) |
