Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788659 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21777892 ~ 21778223 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2047421 | True | 332 | lncRNA | 0.39 | 1 | 21777892 | 21778223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501590 | LOC106581697 | coding | upstream | 76599 | 21669516 ~ 21701293 (+) |
| LOC110501589 | LOC106581698 | coding | upstream | 110489 | 21628544 ~ 21667403 (+) |
| LOC110502066 | NA | coding | upstream | 832721 | 20943924 ~ 20945171 (+) |
| twist2 | twist2 | coding | upstream | 1412360 | 20359640 ~ 20365532 (+) |
| LOC110502064 | LOC106581735 | coding | upstream | 1433936 | 20338128 ~ 20343956 (+) |
| c22h2orf69 | cssa21h2orf69 | coding | downstream | 151139 | 21929362 ~ 21934705 (+) |
| esyt3 | LOC106581688 | coding | downstream | 257149 | 22035372 ~ 22076238 (+) |
| LOC118943635 | NA | coding | downstream | 298154 | 22076377 ~ 22079829 (+) |
| LOC110501601 | LOC106581998 | coding | downstream | 455041 | 22233264 ~ 22235783 (+) |
| LOC110501603 | NA | coding | downstream | 1266393 | 23044616 ~ 23050204 (+) |
| G1788648 | NA | non-coding | upstream | 6664 | 21771029 ~ 21771228 (+) |
| G1788460 | NA | non-coding | upstream | 11755 | 21765907 ~ 21766137 (+) |
| G1788457 | NA | non-coding | upstream | 16028 | 21761216 ~ 21761864 (+) |
| G1788442 | NA | non-coding | upstream | 31075 | 21741537 ~ 21746817 (+) |
| G1788441 | NA | non-coding | upstream | 36395 | 21741002 ~ 21741497 (+) |
| G1788667 | NA | non-coding | downstream | 4990 | 21783213 ~ 21783719 (+) |
| G1788668 | NA | non-coding | downstream | 7866 | 21786089 ~ 21786403 (+) |
| G1788669 | NA | non-coding | downstream | 11073 | 21789296 ~ 21789552 (+) |
| G1788737 | NA | non-coding | downstream | 101476 | 21879699 ~ 21960257 (+) |
| G1788768 | stk17b | non-coding | downstream | 158297 | 21936520 ~ 21940409 (+) |
| G1787719 | NA | other | upstream | 641415 | 21134265 ~ 21136477 (+) |
| G1786330 | NA | other | upstream | 1493321 | 20283181 ~ 20284571 (+) |
| asb1 | asb1 | other | upstream | 1496038 | 20269646 ~ 20281952 (+) |
| G1785947 | znf142 | other | upstream | 2115966 | 19661109 ~ 19661926 (+) |
| LOC110501568 | cnot9 | other | upstream | 2150132 | 19603742 ~ 19627954 (+) |
| G1788811 | LOC106581691 | other | downstream | 217141 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 220250 | 21998473 ~ 21999623 (+) |
| G1790442 | LOC106582152 | other | downstream | 1637870 | 23416093 ~ 23432383 (+) |
| G1790805 | NA | other | downstream | 2340339 | 24118562 ~ 24119475 (+) |
| LOC110501605 | LOC106582130 | other | downstream | 2615845 | 24394068 ~ 24423067 (+) |
