Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788856 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21897596 ~ 21898128 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2047637 | True | 120 | lncRNA | 0.36 | 2 | 21897596 | 21898128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501591 | LOC106581664 | coding | downstream | 131365 | 21708881 ~ 21766231 (-) |
| LOC110501588 | LOC106581699 | coding | downstream | 306597 | 21572564 ~ 21590999 (-) |
| LOC110501587 | LOC106586113 | coding | downstream | 450393 | 21143084 ~ 21447203 (-) |
| LOC100136257 | LOC100136257 | coding | downstream | 1120439 | 20765912 ~ 20777157 (-) |
| LOC110501586 | LOC106581869 | coding | downstream | 1157642 | 20730910 ~ 20739954 (-) |
| ftcdnl1 | LOC106581695 | coding | upstream | 24672 | 21922800 ~ 21936414 (-) |
| stk17b | LOC106581692 | coding | upstream | 38386 | 21936514 ~ 21957704 (-) |
| hecw2a | LOC106581691 | coding | upstream | 71024 | 21969152 ~ 22021354 (-) |
| LOC110502069 | LOC106582011 | coding | upstream | 341050 | 22239178 ~ 22636506 (-) |
| LOC110501602 | LOC106582008 | coding | upstream | 1092566 | 22990694 ~ 22996267 (-) |
| LOC110501594 | LOC106581696 | non-coding | downstream | 108445 | 21788428 ~ 21913721 (-) |
| G1788859 | NA | non-coding | downstream | 109410 | 21787890 ~ 21788186 (-) |
| G1788854 | NA | non-coding | downstream | 111971 | 21783215 ~ 21785625 (-) |
| G1788664 | NA | non-coding | downstream | 115927 | 21781441 ~ 21781669 (-) |
| G1788661 | NA | non-coding | downstream | 119374 | 21777792 ~ 21778222 (-) |
| G1788964 | NA | non-coding | upstream | 42614 | 21940742 ~ 21941547 (-) |
| G1788980 | NA | non-coding | upstream | 66494 | 21964622 ~ 21965058 (-) |
| G1788981 | NA | non-coding | upstream | 68654 | 21966782 ~ 21967087 (-) |
| G1788988 | NA | non-coding | upstream | 80258 | 21978386 ~ 21978618 (-) |
| G1787166 | NA | other | downstream | 1441613 | 20390516 ~ 20455983 (-) |
| G1786832 | LOC100136012 | other | downstream | 1551582 | 20345699 ~ 20346014 (-) |
| znf142 | znf142 | other | downstream | 2238496 | 19655763 ~ 19666201 (-) |
| G1785753 | NA | other | downstream | 2575737 | 19321188 ~ 19321859 (-) |
| G1789581 | NA | other | upstream | 520002 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 1266353 | 23164481 ~ 23169363 (-) |
| LOC110501997 | LOC106582152 | other | upstream | 1534866 | 23368423 ~ 23460589 (-) |
| G1791405 | NA | other | upstream | 2428601 | 24326729 ~ 24327127 (-) |
| G1792342 | LOC106582127 | other | upstream | 2950463 | 24848591 ~ 24849752 (-) |
