G1788768 (stk17b)


Basic Information

Item Value
gene id G1788768
gene name stk17b
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 21936520 ~ 21940409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2047535
GTTTTCTATCATCTTTAATGAGCATTCTTGTTTGCTGATGACACCTAAATATTAGATTGATGTTGATCAGAAGATACAAATGGGGATTTGAAATTATCCATtctaaaaacaaatgtaatatacccACAAATCTATCAAATGTGAAATAAACATCGGTCTGAAGGTTATTGCTTGTGCTTCTAACTGGTATGAGTTTGACTCAGATGTTTCCTTCAGTATTACCCTGGTAAAGTGGGAGAAGATCTCACCACAGGAATGTGAAGTGCAAACTGGTCACCTTTGCCCCCAGAGAACACACAGGTCACTTGACTAGTATCTGTATGTAAAAGTAAATTCAGACAGCCATACAAAATGAAATCAGCAGTGGAGATCTTACAAATATAATCAAGTTGTACAAGTCCACTTTGTGCCGATTGGTGTCAGCAGTGCCTCGGACGTCTGCTTTTCATTTAAGTGTCTGTCTTTAAACGGAGGACAGTACTGACTACTGAACCACTCATTAATGACGTATTGGTGTTCCAGTTCTCCTTTAGGATGACAGCATACAATGAGAGCATGGCCGTGACTGGAGACAGCCCTCTCGAAGACAAAGGCTATTGTGTGTGCCAGGGCAGTGACATCTCTGGGAAACCTTGAGGACCACAACAAACAAGGATATGTGGTCTTTGCACCTCCTTGAACAAAGTGACATGTTCAGCTGAGGTCTGCTGGCAGTTAGGGTTCACAAAAATTCTTCAGGGTGGGTTATtctttcataaattcacaaatggATGGGGAACAACAACAAAAGAGCACTTTCATTTTCTACATGGAAGTGCTCTGCTGGTAAAACTGTACAAATATCTCAGTCGAAACCTTTACATACATCACTTCCGTAATCAATGTGTTCTCATTCTCTGTAACCATCTCAATGTCATACCCTATCCTCATAACCATCTTTTCTCTTTTAAATCCATCTCTAATCACTTTTCCAAACCTTTCATGGAAATCCCACATTCACCACCAAAGCATATTTCAATTTCATGTCACCTTACCAAAACAGCTTTTTGTTAAGCAGTGCCATCAATACTATCCCATACAACCCGTATCTTCATAAACCCATTTGAATCCAGTTAAATAAAGCACACACATATGTACATCTAAATATAAACAAAACACCATCCCATTACATAAATATATTGAGAATCAGATTAGAATATAAAACTTATTTAAAGAGCAAATATAAAGAGGCACACGGTAGTTACGACCAAAGTGAATGGTAATTTGCCCTGAGATGAGGAAATGGAATGAACAGAGGAGTAAGACTGAATAAACTCACCTTCATACACAGACAATCTGTTATGATTCCCAAATCTACCCGACTCCCATTAAACTTAAGGCTTCCTAGCCATAAAAAAAAACCACAGTAGCTTTTTAATACCAATTAAAGGAATGCAGATTAAATTACTTCAGTAAATATCAGGAAATACATTGTGTTCAAGTTACACAAAAATAACATGTAATGCAAAACAACTTTTTCCAGTTGAGTAAGCAAATTAAATACCCAGATGATAAATAGTTAAATGCTTCAGTCACAGTTCCCCTAAGCAAATGACTCAAGAGGAACTGAAAACATTTGAAGAAAGACATTCGAGTAAGCATGGGTGGGGTGTGGTGTTTACTGTCCATGAGTCACCTTTTTACAGAACCCTCTTAAATCTCTATTACTGTGGAATTGTAAATCAGAGGAAGAGTTGGGGTTAACAGTAAACTGTAAATGTTATAGACAGACACCAGTGTGACTTGCTGGCTTACTAATTATGCAGGCCAGGGCTTGGTACTGTGCATAGACAACCTGTCTAAGATGACATCATACTGTGCTTTGAGATGTGGCGTGCTGGAGAGCAAGATAAGGGAATGTCACAATGTCACAGAATATAATGTGCGCAAGCCATGGCCTGAAGCTTGTTTGACAGTAGGGAGGTAATGTACAGCTTGGGTCAGGCAAACAAGGACATAGTGTGAGGACGTACTTTACTTTCACTTCCTCAAAGTCTGATTTAGCCCATATCTGCACAGTTCAGTGTTCTGTCGAATGATTTTAGCACAAAATACTAAGAACACTGACGACCACTTACTGGCCTGGCAAAAATGGTCAAGTAATAATTTGTTGACTATTTAAATGTCTCCTTTAAAAGTTACTTGTGGCAAAACAGTATTGCATAAATTTCCCTTGAGATATATCTGGCCTCATTCTTTAAATTCAGGGACAAAATATACCTGACAAAACAAAGACACTAGAAATGACCAAATCAGCTCACAATAAAATAGAATACTAATCTTAAATCAATGCATTATTTAGAAACACGAACTACACAGAAACAGTGACAAATTGACGTTAGATCACAAAGGAAGCTGGCTATCTTTGGTTTGGCTGGGCGCTCTTGGATACTGGCGagcagtagaacagaacagaagcgCTCTTGGGTAGGTGACACTTGCCGGCAGGTTCCTTGCTGCATAAAACCAATAAAAGCAAAATAGGAGCTTGTGGGAGGGGTGCGCCTGAGTCGCTCTTTCCCCCTCAGAAGTCCCCGTCTCCACCATTGGTGGTGGCAGGTGTCTCCTCCTCAAAGCGAAACCTCTTGGCCTGGGTGTGGGGTGAGTCCAAGGTGAAGTTCTCCTTGTCCTCTGGAGTTTTGACCAGCAGCTTGCGGATGAAGTCGACAGCGAGCTCCGACACCCTGGAGAAGGCCTCTTGGCTATAGTCCACGTTGACCTGGGACACGTTCAGGTACGTCTCCTGCTTGTCATCCCCTGCAAATGGAGACTCACCCGTCACCAGCATGTAGGCAATCACTCCGACACTCCACAAGTCAGTTGCCGTTGTAATAGGCTCATAGTTCAGGATCTCTGGAGCCACGTACTCGGGCGTGCCCAAGATCTCTCGAAGCTCTCCGACCATGCCCAGTTTGCGTGCCAGGCCAAAGTCCACAATCTTTATGTCCCCCAGCGGTGCCAGGCTGGTTAGAAGGATGTTCTGGGgctgaaagaaagagggagggattggGTGAGTAGTCCAAAAGGGTAACAAAGTTGTGCAGAGTCATAATACAGCTGTCATAATACAGCTGTATACAGCAGGTCCAGTCATTCACAATACTTCATGCATGAGATTGTGATCGCAGCAAAGATATTCATCTTTACATCACCACTTGCATAAGAGAGCAAATAGGGTTGAGAGGTGTATTTTAGGTGTATGTACATATGTTTGTATGTGCACAGTGCACTTCtgcttatatacagtgccttgcgaaagtattcggcccc

Function

symbol description
stk17b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b).

NR:

description
serine/threonine-protein kinase 17B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2047535 True 3309 lncRNA 0.42 4 21936520 21940409

Neighbor

gene id symbol gene type direction distance location
c22h2orf69 cssa21h2orf69 coding upstream 1815 21929362 ~ 21934705 (+)
LOC110501590 LOC106581697 coding upstream 235227 21669516 ~ 21701293 (+)
LOC110501589 LOC106581698 coding upstream 269117 21628544 ~ 21667403 (+)
LOC110502066 NA coding upstream 991349 20943924 ~ 20945171 (+)
twist2 twist2 coding upstream 1570988 20359640 ~ 20365532 (+)
esyt3 LOC106581688 coding downstream 94963 22035372 ~ 22076238 (+)
LOC118943635 NA coding downstream 135968 22076377 ~ 22079829 (+)
LOC110501601 LOC106581998 coding downstream 292855 22233264 ~ 22235783 (+)
LOC110501603 NA coding downstream 1104207 23044616 ~ 23050204 (+)
LOC110502117 NA coding downstream 1112629 23053038 ~ 23055743 (+)
G1788669 NA non-coding upstream 146968 21789296 ~ 21789552 (+)
G1788668 NA non-coding upstream 150117 21786089 ~ 21786403 (+)
G1788667 NA non-coding upstream 152801 21783213 ~ 21783719 (+)
G1788659 NA non-coding upstream 158297 21777892 ~ 21778223 (+)
G1788648 NA non-coding upstream 165292 21771029 ~ 21771228 (+)
G1788769 stk17b non-coding downstream 2653 21943062 ~ 21957651 (+)
G1788791 NA non-coding downstream 28230 21968639 ~ 21971927 (+)
G1788792 NA non-coding downstream 33198 21973607 ~ 21974527 (+)
G1788793 NA non-coding downstream 35084 21975493 ~ 21975781 (+)
G1788794 NA non-coding downstream 36000 21976409 ~ 21976620 (+)
G1787719 NA other upstream 800043 21134265 ~ 21136477 (+)
G1786330 NA other upstream 1651949 20283181 ~ 20284571 (+)
asb1 asb1 other upstream 1654666 20269646 ~ 20281952 (+)
G1785947 znf142 other upstream 2274594 19661109 ~ 19661926 (+)
LOC110501568 cnot9 other upstream 2308760 19603742 ~ 19627954 (+)
G1788811 LOC106581691 other downstream 54955 21995364 ~ 21996093 (+)
G1788815 LOC100136012 other downstream 58064 21998473 ~ 21999623 (+)
G1790442 LOC106582152 other downstream 1475684 23416093 ~ 23432383 (+)
G1790805 NA other downstream 2178153 24118562 ~ 24119475 (+)
LOC110501605 LOC106582130 other downstream 2453659 24394068 ~ 24423067 (+)

Expression


Co-expression Network