Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788769 |
| gene name | stk17b |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21943062 ~ 21957651 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| stk17b | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b). |
| description |
|---|
| serine/threonine-protein kinase 17B-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2047536 | False | 572 | lncRNA | 0.51 | 3 | 21943062 | 21957651 |
| TU2047537 | True | 478 | lncRNA | 0.43 | 2 | 21956895 | 21957651 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c22h2orf69 | cssa21h2orf69 | coding | upstream | 8357 | 21929362 ~ 21934705 (+) |
| LOC110501590 | LOC106581697 | coding | upstream | 241769 | 21669516 ~ 21701293 (+) |
| LOC110501589 | LOC106581698 | coding | upstream | 275659 | 21628544 ~ 21667403 (+) |
| LOC110502066 | NA | coding | upstream | 997891 | 20943924 ~ 20945171 (+) |
| twist2 | twist2 | coding | upstream | 1577530 | 20359640 ~ 20365532 (+) |
| esyt3 | LOC106581688 | coding | downstream | 77721 | 22035372 ~ 22076238 (+) |
| LOC118943635 | NA | coding | downstream | 118726 | 22076377 ~ 22079829 (+) |
| LOC110501601 | LOC106581998 | coding | downstream | 275613 | 22233264 ~ 22235783 (+) |
| LOC110501603 | NA | coding | downstream | 1086965 | 23044616 ~ 23050204 (+) |
| LOC110502117 | NA | coding | downstream | 1095387 | 23053038 ~ 23055743 (+) |
| G1788768 | stk17b | non-coding | upstream | 2653 | 21936520 ~ 21940409 (+) |
| G1788669 | NA | non-coding | upstream | 153510 | 21789296 ~ 21789552 (+) |
| G1788668 | NA | non-coding | upstream | 156659 | 21786089 ~ 21786403 (+) |
| G1788667 | NA | non-coding | upstream | 159343 | 21783213 ~ 21783719 (+) |
| G1788659 | NA | non-coding | upstream | 164839 | 21777892 ~ 21778223 (+) |
| G1788791 | NA | non-coding | downstream | 10988 | 21968639 ~ 21971927 (+) |
| G1788792 | NA | non-coding | downstream | 15956 | 21973607 ~ 21974527 (+) |
| G1788793 | NA | non-coding | downstream | 17842 | 21975493 ~ 21975781 (+) |
| G1788794 | NA | non-coding | downstream | 18758 | 21976409 ~ 21976620 (+) |
| G1788795 | NA | non-coding | downstream | 19061 | 21976712 ~ 21977322 (+) |
| G1787719 | NA | other | upstream | 806585 | 21134265 ~ 21136477 (+) |
| G1786330 | NA | other | upstream | 1658491 | 20283181 ~ 20284571 (+) |
| asb1 | asb1 | other | upstream | 1661208 | 20269646 ~ 20281952 (+) |
| G1785947 | znf142 | other | upstream | 2281136 | 19661109 ~ 19661926 (+) |
| LOC110501568 | cnot9 | other | upstream | 2315302 | 19603742 ~ 19627954 (+) |
| G1788811 | LOC106581691 | other | downstream | 37713 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 40822 | 21998473 ~ 21999623 (+) |
| G1790442 | LOC106582152 | other | downstream | 1458442 | 23416093 ~ 23432383 (+) |
| G1790805 | NA | other | downstream | 2160911 | 24118562 ~ 24119475 (+) |
| LOC110501605 | LOC106582130 | other | downstream | 2436417 | 24394068 ~ 24423067 (+) |
