Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788993 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21986478 ~ 21986709 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2047785 | True | 232 | lncRNA | 0.34 | 1 | 21986478 | 21986709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stk17b | LOC106581692 | coding | downstream | 28774 | 21936514 ~ 21957704 (-) |
| ftcdnl1 | LOC106581695 | coding | downstream | 50064 | 21922800 ~ 21936414 (-) |
| LOC110501594 | LOC106581696 | coding | downstream | 72757 | 21788428 ~ 21913721 (-) |
| LOC110501591 | LOC106581664 | coding | downstream | 220247 | 21708881 ~ 21766231 (-) |
| LOC110501588 | LOC106581699 | coding | downstream | 395479 | 21572564 ~ 21590999 (-) |
| LOC110502069 | LOC106582011 | coding | upstream | 252469 | 22239178 ~ 22636506 (-) |
| LOC110501602 | LOC106582008 | coding | upstream | 1003985 | 22990694 ~ 22996267 (-) |
| LOC118943636 | LOC106582008 | coding | upstream | 1037261 | 23023970 ~ 23042872 (-) |
| dcbld2 | LOC106582006 | coding | upstream | 1069935 | 23056644 ~ 23079508 (-) |
| LOC110502006 | LOC106582004 | coding | upstream | 1211057 | 23197766 ~ 23235688 (-) |
| G1788992 | NA | non-coding | downstream | 3248 | 21982855 ~ 21983230 (-) |
| G1788990 | NA | non-coding | downstream | 4599 | 21981661 ~ 21981879 (-) |
| G1788988 | NA | non-coding | downstream | 7860 | 21978386 ~ 21978618 (-) |
| hecw2a | LOC106581691 | non-coding | downstream | 16948 | 21969152 ~ 22021354 (-) |
| G1788981 | NA | non-coding | downstream | 19391 | 21966782 ~ 21967087 (-) |
| G1788994 | NA | non-coding | upstream | 318 | 21987027 ~ 21987240 (-) |
| G1788996 | NA | non-coding | upstream | 2269 | 21988978 ~ 21989245 (-) |
| G1788999 | NA | non-coding | upstream | 7440 | 21994149 ~ 21994387 (-) |
| G1789000 | LOC100194703 | non-coding | upstream | 10040 | 21996749 ~ 21997036 (-) |
| G1789001 | NA | non-coding | upstream | 11891 | 21998600 ~ 21998967 (-) |
| G1787166 | NA | other | downstream | 1530495 | 20390516 ~ 20455983 (-) |
| G1786832 | LOC100136012 | other | downstream | 1640464 | 20345699 ~ 20346014 (-) |
| znf142 | znf142 | other | downstream | 2327378 | 19655763 ~ 19666201 (-) |
| G1785753 | NA | other | downstream | 2664619 | 19321188 ~ 19321859 (-) |
| G1789581 | NA | other | upstream | 431421 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 1177772 | 23164481 ~ 23169363 (-) |
| LOC110501997 | LOC106582152 | other | upstream | 1446285 | 23368423 ~ 23460589 (-) |
| G1791405 | NA | other | upstream | 2340020 | 24326729 ~ 24327127 (-) |
| G1792342 | LOC106582127 | other | upstream | 2861882 | 24848591 ~ 24849752 (-) |
