G1789581


Basic Information

Item Value
gene id G1789581
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 22418130 ~ 22419498 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2048419
AAACATTCCtataagaagtacgccatgctcaaccatccgatctacaagacactcttctttaagaagtacaccatgctcaaccatccgatcaacaagactctcttctttaagaagtacaccatgctcaaccatccgatcaacaagacactcttctttaagaagtacaccatgctcaaccatacgatcaacaagacactcttctttaagaagtacgccatgctcaaccatacgatcaacaagacactcttctttaagaagtacaccatgctcaaccatacgatcaacaagacactcttctttaagaagtacgccatgctcaaccatacgatcaacaagacactcttctttaagaagtatgccatgctcaaccatacgatcaacaagatggtcttctttaagaagtacaccaccGCTTC

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2048419 True 416 TUCP 0.41 2 22418130 22419498

Neighbor

gene id symbol gene type direction distance location
hecw2a LOC106581691 coding downstream 396776 21969152 ~ 22021354 (-)
stk17b LOC106581692 coding downstream 460426 21936514 ~ 21957704 (-)
ftcdnl1 LOC106581695 coding downstream 481716 21922800 ~ 21936414 (-)
LOC110501594 LOC106581696 coding downstream 504409 21788428 ~ 21913721 (-)
LOC110501591 LOC106581664 coding downstream 651899 21708881 ~ 21766231 (-)
LOC110501602 LOC106582008 coding upstream 571196 22990694 ~ 22996267 (-)
LOC118943636 LOC106582008 coding upstream 604472 23023970 ~ 23042872 (-)
dcbld2 LOC106582006 coding upstream 637146 23056644 ~ 23079508 (-)
LOC110502006 LOC106582004 coding upstream 778268 23197766 ~ 23235688 (-)
LOC110502001 LOC106582154 coding upstream 878816 23298314 ~ 23327132 (-)
G1789574 NA non-coding downstream 17402 22399036 ~ 22400728 (-)
G1789528 NA non-coding downstream 78937 22338345 ~ 22339193 (-)
G1789168 LOC106581998 non-coding downstream 182370 22234719 ~ 22235760 (-)
G1789159 NA non-coding downstream 189724 22228203 ~ 22228406 (-)
G1789146 NA non-coding downstream 196306 22221556 ~ 22221824 (-)
G1789587 NA non-coding upstream 10990 22430488 ~ 22430688 (-)
G1789620 NA non-coding upstream 69360 22488858 ~ 22498544 (-)
G1789619 NA non-coding upstream 82157 22501655 ~ 22520671 (-)
G1789659 NA non-coding upstream 135520 22555018 ~ 22555252 (-)
G1789663 NA non-coding upstream 138751 22558249 ~ 22558473 (-)
G1787166 NA other downstream 1962147 20390516 ~ 20455983 (-)
G1786832 LOC100136012 other downstream 2072116 20345699 ~ 20346014 (-)
znf142 znf142 other downstream 2759030 19655763 ~ 19666201 (-)
G1785753 NA other downstream 3096271 19321188 ~ 19321859 (-)
G1790280 NA other upstream 744983 23164481 ~ 23169363 (-)
LOC110501997 LOC106582152 other upstream 1013496 23368423 ~ 23460589 (-)
G1791405 NA other upstream 1907231 24326729 ~ 24327127 (-)
G1792342 LOC106582127 other upstream 2429093 24848591 ~ 24849752 (-)
G1792345 NA other upstream 2437326 24856824 ~ 24857885 (-)

Expression


Co-expression Network