G1790287


Basic Information

Item Value
gene id G1790287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23190737 ~ 23192377 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2049168
ATCAGCTCcatgtgattttaattttggcaATCGGTTCCAAAGTATTCTCGCACATAATAGAGATATGTGATcgcatacaaatgtaagcaagggtTGAAATTATTATTATCTGTTTGCCCTTCTTGCGGGCAATTTGCTGTCTACAAATGTGTAATTAAGTTCCAGCCCCCTGACCAAAAAgatcaaataaatacatttggtacataattggtcaaGCCTAAAATTAACAAATTTAGAGTTGGCCTACAATTATacttaatttgtattttattttgaatcGCCTAGTAATAACCACTGGTGAGTGATGTGAACATGAATTTCTGTGGTCCCTACTGTTGCAGTCATGACGCAAGTGgagctatgctgtcaaatcctcccacgtTTCTCGTTTGACCCGTTGTTTTCAGCAATTGATATTTTTGAATTTGGTTATCATATTGAAGATTTACTAGCAACAAACTACAGTGTGAcagatcgaggcacagatctggggaagggtaccaaaaaatgtctgcagtattgaaggtccccaagaacacagtgacctccatcagtCTTAAAgtgaggaagtttggaaccaccaagactcttcctagtgctggctgCCCATGTGAGTGTCATGACGAGAAGGCAAACTTTTCTAGCTATGCCAGGCAAAATCTGGtatcagctcattgttatggatgcatCAAAATTAATTTaaatagaaaacagcttaaacaaacaaATGCATCTACTccgctgttattctggctgcagagGTCGTGACGGCGTTGACcgtagctagttggctagctagttggGACAAGAACATTGCCAGCGAGCATGGCAACCGAACATATCgaatgaacaactgggtcgcgccTCTAGCAACTGAAAAATTAGAAAGTTTGTCTTACTTGGTccattatttacaagttaatatACACAACAATATTTCTTTACTCCCATTAAGTCTGAAGATAAAGTTTGTATTGCAAGGTGGTTCTACTGACTTCAGGTGTGTCAAGCACTTAGAAAAACACCTGAATGGGTTCTGTAGCCAATGAAAGACCAAATAAAGAGAAACGAGCAGACACTGAGGCCTTGTAAGATTCAAGGGCTCAGTTGGAAAGAACGGCATAAGGGATGCTTTGTTCTTTCATCTTTAACACATTTCTAACTCATCTGGAGTCATTTCAATTTAGAGAATGTGCCAGGAATGTAATGTTATGTGGACTGATGCACATTGGAAGTTACCCAAATTGTCCACCTCTGGAGCCTGTTCAGGAGGGTGCAACATCACAGAATGTTCAAATAGGAATGCATTGTGTATGTACAATGAGGAAATGTGTCAGTTTTACACAGTACATCCATCTACAACATTCTGAACATTTCAACTCAGTGTCTTTAGCCTTGCAATCTTTTGCTGTTTGAGTTTAAATATGAGACAGCCATGTCAATAAAAGGCTTATTTATGTGGAAACCAACAACCAAATGAAGATTGTTTTACATTGTGTATAGCTGCTCACAAAATGGCTGCAGCTGTTATTTTCAATCCCAATCGTTATGTTAGTGTTGAACAGaaaattgtatttttgtttcagatATGTACAACCATTCCTGTATCTATTTTCTACAATAAATCCTTACGTATGGTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2049168 True 1641 lncRNA 0.39 1 23190737 23192377

Neighbor

gene id symbol gene type direction distance location
dcbld2 LOC106582006 coding downstream 111229 23056644 ~ 23079508 (-)
LOC118943636 LOC106582008 coding downstream 147865 23023970 ~ 23042872 (-)
LOC110501602 LOC106582008 coding downstream 194470 22990694 ~ 22996267 (-)
LOC110502069 LOC106582011 coding downstream 554231 22239178 ~ 22636506 (-)
hecw2a LOC106581691 coding downstream 1169383 21969152 ~ 22021354 (-)
LOC110502006 LOC106582004 coding upstream 5389 23197766 ~ 23235688 (-)
LOC110502001 LOC106582154 coding upstream 105937 23298314 ~ 23327132 (-)
LOC110502000 LOC106582153 coding upstream 141219 23333596 ~ 23351721 (-)
LOC110502015 renr coding upstream 162551 23354928 ~ 23363406 (-)
LOC110501997 LOC106582152 coding upstream 176046 23368423 ~ 23460589 (-)
G1790215 NA non-coding downstream 171896 23018621 ~ 23018841 (-)
G1789802 NA non-coding downstream 407687 22782723 ~ 22783050 (-)
G1789800 NA non-coding downstream 408139 22782384 ~ 22782598 (-)
G1789791 NA non-coding downstream 415461 22775038 ~ 22775276 (-)
G1789773 NA non-coding downstream 424670 22765753 ~ 22766067 (-)
G1790289 NA non-coding upstream 1443 23193820 ~ 23194168 (-)
G1790305 NA non-coding upstream 44858 23237235 ~ 23237520 (-)
G1790316 NA non-coding upstream 56615 23248992 ~ 23249257 (-)
G1790318 LOC106581475 non-coding upstream 57614 23249991 ~ 23250229 (-)
G1790319 NA non-coding upstream 58411 23250788 ~ 23251076 (-)
G1790280 NA other downstream 21374 23164481 ~ 23169363 (-)
G1789581 NA other downstream 771239 22418130 ~ 22419498 (-)
LOC110501594 LOC106581696 other downstream 1369792 21788428 ~ 21913721 (-)
G1787166 NA other downstream 2734754 20390516 ~ 20455983 (-)
G1786832 LOC100136012 other downstream 2844723 20345699 ~ 20346014 (-)
G1791405 NA other upstream 1134352 24326729 ~ 24327127 (-)
G1792342 LOC106582127 other upstream 1656214 24848591 ~ 24849752 (-)
G1792345 NA other upstream 1664447 24856824 ~ 24857885 (-)
G1792433 NA other upstream 1793582 24985959 ~ 24986268 (-)

Expression


Co-expression Network