G1790566


Basic Information

Item Value
gene id G1790566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23626743 ~ 23627099 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2049483
cttatatgtacatattctcattcacccctttagatttgtgtgtattaggtagttgttggggaattgttagattacttgttagatattactgcactgttggaactagaagcacaagcatttcactacactcacattaacatctgctaaccatgtgtatgtgaccaataaaatttgatttgattaccatCACAAGTATAGCCTCTTATAAGGCACACCTCAAAATGTATTAATGAGCcacaacaataccatgcaccaACAAAATAattttggcactccaaaatgacattgtggtactgtattctgtggCAGTGGTACTGAATTGCAGTAAATTACTGTCAGGACAGTAGCCAGTAAATT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2049483 True 357 lncRNA 0.36 1 23626743 23627099

Neighbor

gene id symbol gene type direction distance location
LOC110502013 tfg coding upstream 436380 23164465 ~ 23190363 (+)
LOC110502028 LOC106586704 coding upstream 465731 23160350 ~ 23161012 (+)
LOC110502004 LOC106582005 coding upstream 479239 23123886 ~ 23147504 (+)
LOC110502117 NA coding upstream 571000 23053038 ~ 23055743 (+)
LOC110501603 NA coding upstream 576539 23044616 ~ 23050204 (+)
LOC110502031 NA coding downstream 6064 23633163 ~ 23635182 (+)
LOC110502002 LOC100195685 coding downstream 72521 23699620 ~ 23713577 (+)
LOC110502012 LOC106582145 coding downstream 164545 23791644 ~ 23799947 (+)
LOC110502020 LOC106582143 coding downstream 213799 23840898 ~ 23868839 (+)
LOC110502009 LOC106582142 coding downstream 254134 23881233 ~ 23901983 (+)
G1790551 NA non-coding upstream 11540 23604635 ~ 23615203 (+)
G1790549 NA non-coding upstream 25924 23600528 ~ 23600819 (+)
G1790546 NA non-coding upstream 31120 23595382 ~ 23595623 (+)
G1790542 NA non-coding upstream 39078 23587444 ~ 23587665 (+)
G1790511 NA non-coding upstream 90751 23534515 ~ 23535992 (+)
G1790576 NA non-coding downstream 27916 23655015 ~ 23655248 (+)
G1790578 NA non-coding downstream 34773 23661872 ~ 23662074 (+)
G1790427 NA non-coding downstream 113463 23740562 ~ 23743194 (+)
G1790676 NA non-coding downstream 218566 23845665 ~ 23847029 (+)
G1790693 NA non-coding downstream 278319 23905418 ~ 23905728 (+)
G1790442 LOC106582152 other upstream 194360 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 1627120 21998473 ~ 21999623 (+)
G1788811 LOC106581691 other upstream 1630650 21995364 ~ 21996093 (+)
G1787719 NA other upstream 2490266 21134265 ~ 21136477 (+)
G1786330 NA other upstream 3342172 20283181 ~ 20284571 (+)
G1790805 NA other downstream 491463 24118562 ~ 24119475 (+)
LOC110501605 LOC106582130 other downstream 766969 24394068 ~ 24423067 (+)
G1792040 NA other downstream 1215843 24842942 ~ 24843285 (+)
LOC110501609 fam155a other downstream 1221867 24848514 ~ 25013655 (+)
G1792649 NA other downstream 1667447 25294546 ~ 25296557 (+)

Expression


Co-expression Network