G1790576


Basic Information

Item Value
gene id G1790576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23655015 ~ 23655248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2049496
atcctggacttcctgacgggccgcccccaggttgtaAGGGGAGGTAATAATACATCttccatgctgatcctcaacacggggcccctcagcGGTGCACtctcagtcccctcttgtactccctgttcactcatgactgcatggccaggcacgactccaacaccatcattaagtttgccgacgacacaacagtggtaggcctgatcactgacaatgatgagacagcctataggaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2049496 True 234 lncRNA 0.54 1 23655015 23655248

Neighbor

gene id symbol gene type direction distance location
LOC110502031 NA coding upstream 19833 23633163 ~ 23635182 (+)
LOC110502013 tfg coding upstream 464652 23164465 ~ 23190363 (+)
LOC110502028 LOC106586704 coding upstream 494003 23160350 ~ 23161012 (+)
LOC110502004 LOC106582005 coding upstream 507511 23123886 ~ 23147504 (+)
LOC110502117 NA coding upstream 599272 23053038 ~ 23055743 (+)
LOC110502002 LOC100195685 coding downstream 44372 23699620 ~ 23713577 (+)
LOC110502012 LOC106582145 coding downstream 136396 23791644 ~ 23799947 (+)
LOC110502020 LOC106582143 coding downstream 185650 23840898 ~ 23868839 (+)
LOC110502009 LOC106582142 coding downstream 225985 23881233 ~ 23901983 (+)
LOC110502003 LOC106582138 coding downstream 300915 23956163 ~ 24023376 (+)
G1790566 NA non-coding upstream 27916 23626743 ~ 23627099 (+)
G1790551 NA non-coding upstream 39812 23604635 ~ 23615203 (+)
G1790549 NA non-coding upstream 54196 23600528 ~ 23600819 (+)
G1790546 NA non-coding upstream 59392 23595382 ~ 23595623 (+)
G1790542 NA non-coding upstream 67350 23587444 ~ 23587665 (+)
G1790578 NA non-coding downstream 6624 23661872 ~ 23662074 (+)
G1790427 NA non-coding downstream 85314 23740562 ~ 23743194 (+)
G1790676 NA non-coding downstream 190417 23845665 ~ 23847029 (+)
G1790693 NA non-coding downstream 250170 23905418 ~ 23905728 (+)
G1790695 NA non-coding downstream 253512 23908760 ~ 23908966 (+)
G1790442 LOC106582152 other upstream 222632 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 1655392 21998473 ~ 21999623 (+)
G1788811 LOC106581691 other upstream 1658922 21995364 ~ 21996093 (+)
G1787719 NA other upstream 2518538 21134265 ~ 21136477 (+)
G1786330 NA other upstream 3370444 20283181 ~ 20284571 (+)
G1790805 NA other downstream 463314 24118562 ~ 24119475 (+)
LOC110501605 LOC106582130 other downstream 738820 24394068 ~ 24423067 (+)
G1792040 NA other downstream 1187694 24842942 ~ 24843285 (+)
LOC110501609 fam155a other downstream 1193718 24848514 ~ 25013655 (+)
G1792649 NA other downstream 1639298 25294546 ~ 25296557 (+)

Expression


Co-expression Network