G1791091


Basic Information

Item Value
gene id G1791091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23799990 ~ 23802042 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2050074
gggggccgaatactttcgcaaggcactgtacatagagaACCTGGCTCCTATCGTGGGGACTGGGCCTCACATGTACACTTAGCAGGATCGAACATTTTACTGTCTTCTTTTATCTTGTGATATGAAGAGAAAAAACGTTTTTCaaatctgtttttttgttgtcacgGAGACATGCTTTGAACAGAATCTGTGCTCTCCTttgttttctccccccccccatgCCTCATTCTGTCTTAGCTGCATGGGCTGAATGctctatatgtaatataatatgaaGTGTAATAGTATCTGAAAGGAAGTCGAATGTGTTACTGTTTGCGTTCTATGCACTCATTTAGAGTCAGATGATTTACTGGTATTACTGCTCTGTTTATCGGCACTCCCTGTCTGTTAACTGATATTCCATGTCCATAGAATTGTGTTTCAGCTCCATTCCTCATTTTATTCCAGAAATCTTTCCAATTCCTAAATCATCTGTGAATATCTATGAATATAATAATttatttttctcaggctttctctgtcccatagATCCCCCCCAACAGCCCTGCTCCCCATCCCATCCCTTCtctaccactccctctctctttgtgctGTGTCGGCTTAGTGTGTGTGCGGCGCTTTGGAGTTGGTGTGTAAGAGAATTAGATTAAGTTGATAGAGATGGGCAGGGATTGAGTGTGATAAAAATTAGAATGTACAAATCTGACATTCCCTGTCACCTTTCGTATCATCACTcttcacacacacattccctccaGTGTTTGATACATGTACCTATGTGTTTCATGGTGGATATCCCCCTTCTTGCTTCTCTTGTCAAATCTCAAAGTCTCAGACCTCCTGGTTTTAAAAGCAGAGGCTAAAGAAATACTGACCTCAGACCAGTTTGATGGTAAAATTGATCTCGGACCAATGTGTGCGAGGTGAAAAACGGACCTgagcccagattcacaaaacacgTATtgtgcaaaaacctaagaaaaataAGCTCCTGAGTGCAATTCCTCAACAATCTCATATCTTCTTGCCATTAAAAAAACAAGGTGTCTAGCTAGACATGGCAAATGTGTTAGCATATTCCTTACTGAAAATACTGTTGTAAAACATGTTCTTGGATTTAAAATAATCAATACTGAAACTTTCAGATGATGGTTGAGTGAATTAAATATGTTCAATTGCTTTCATGAGCTTTTTCTCTCACTGCCCTGAGTTTAGCTATATCTTGGAATTAAGGACATTATTTTCAACAATCTAATTTATTAATGTTTTTCTCAAGGCAAAACATAAGAAATAGCGCAATTGTTTTCCCCAATAACCTTTGAAGAATAGCAACTTAATTTCCTTCTTAAATCTATAGTTAAGGAAAAAAtgccagttaagaacacatttaaggttttgtgaatctgggtCCTGATATGGAGGGCACAACATCAATGTTTAGATCAGATGTCATTGTCTATTAAGTAGTGTTTGTTacatttctatttttttatttttattttattttacctttatttaaccaggcaagtcagttaagaacaaattcttattttcaatgacggcctgggaacagtgggttaactgcctgttcaggggcagaacgacagattcgtaccttgtcagctcgggggtttgaactcgcaaccttccggttactagtccaacactctaaccactaggctaccctgccgccattCAGAATGTTTCACCTCACTGAACACACCCCAGATCTGGGATCAGTATTTAGAGGCAGTAGAGACCAGACATACCCCCTCCCAAAATTAAGTCAAACTACAGCCTCCAATAGACATGAATGTGACATTCATATTGTGCAATTATTCCacagatctacacacacacaaactgaatcGGGTAAATGTGTTGTCGAGGATACTCGTGCCGTCTTTCATTTGTTAATTCTGACTTTCGTTGTACCTTTACAAAGCTTTCTACACACATCccatcaataaaaaaaatgttaataCA
>TU2050073
gggggccgaatactttcgcaaggcactgtacatagagaACCTGGCTCCTATCGTGGGGACTGGGCCTCACATGTACACTTAGCAGGATCGAACATTTTACTGTCTTCTTTTATCTTGTGATATGAAGAGAAAAAACGTTTTTCaaatctgtttttttgttgtcacgGAGACATGCTTTGAACAGAATCTGTGCTCTCCTttgttttctccccccccccatgCCTCATTCTGTCTTAGCTGCATGGGCTGAATGctctatatgtaatataatatgaaGTGTAATAGTATCTGAAAGGAAGTCGAATGTGTTACTGTTTGCGTTCTATGCACTCATTTAGAGTCAGATGATTTACTGGTATTACTGCTCTGTTTATCGGCACTCCCTGTCTGTTAACTGATATTCCATGTCCATAGAATTGTGTTTCAGCTCCATTCCTCATTTTATTCCAGAAATCTTTCCAATTCCTAAATCATCTGTGAATATCTATGAATATAATAATttatttttctcaggctttctctgtcccatagATCCCCCCCAACAGCCCTGCTCCCCATCCCATCCCTTCtctaccactccctctctctttgtgctGTGTCGGCTTAGTGTGTGTGCGGCGCTTTGGAGTTGGTGTGTAAGAGAATTAGATTAAGTTGATAGAGATGGGCAGGGATTGAGTGTGATAAAAATTAGAATGTACAAATCTGACATTCCCTGTCACCTTTCGTATCATCACTcttcacacacacattccctccaGTGTTTGATACATGTACCTATGTGTTTCATGGTGGATATCCCCCTTCTTGCTTCTCTTGTCAAATCTCAAAGTCTCAGACCTCCTGGTTTTAAAAGCAGAGGCTAAAGAAATACTGACCTCAGACCAGTTTGATGGTAAAATTGATCTCGGACCAATGTGTGCGAGGTGAAAAACGGACCTgagcccagattcacaaaacacgTATtgtgcaaaaacctaagaaaaataAGCTCCTGAGTGCAATTCCTCAACAATCTCATATCTTCTTGCCATTAAAAAAACAAGGTGTCTAGCTAGACATGGCAAATGTGTTAGCATATTCCTTACTGAAAATACTGTTGTAAAACATGTTCTTGGATTTAAAATAATCAATACTGAAACTTTCAGATGATGGTTGAGTGAATTAAATATGTTCAATTGCTTTCATGAGCTTTTTCTCTCACTGCCCTGAGTTTAGCTATATCTTGGAATTAAGGACATTATTTTCAACAATCTAATTTATTAATGTTTTTCTCAAGGCAAAACATAAGAAATAGCGCAATTGTTTTCCCCAATAACCTTTGAAGAATAGCAACTTAATTTCCTTCTTAAATCTATAGTTAAGGAAAAAAtgccagttaagaacacatttaaggttttgtgaatctgggtCCTGATATGGAGGGCACAACATCAATGTTTAGATCAGATGTCATTGTCTATTAAGTAGTGTTTGTTacatttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2050074 False 1989 lncRNA 0.39 2 23799990 23802042
TU2050073 True 1486 lncRNA 0.38 2 23800493 23802042

Neighbor

gene id symbol gene type direction distance location
LOC110502024 LOC106582147 coding downstream 11377 23776064 ~ 23788613 (-)
LOC110502018 LOC106582148 coding downstream 36870 23738606 ~ 23763120 (-)
LOC110502021 LOC106582149 coding downstream 181942 23607430 ~ 23618048 (-)
LOC110502029 g12 coding downstream 214517 23583447 ~ 23585473 (-)
si:dkey-100n23.5 LOC106582150 coding downstream 220998 23476938 ~ 23578992 (-)
appb LOC106582144 coding upstream 1535 23803577 ~ 23835647 (-)
LOC110502014 LOC106582141 coding upstream 131818 23933860 ~ 23938722 (-)
LOC110502070 NA coding upstream 150533 23951016 ~ 24038256 (-)
LOC110502010 LOC106582139 coding upstream 220345 24022387 ~ 24050582 (-)
LOC110502071 LOC106582043 coding upstream 251220 24053262 ~ 24072305 (-)
G1791104 NA non-coding downstream 121530 23678164 ~ 23678460 (-)
G1791084 NA non-coding downstream 143491 23656271 ~ 23656499 (-)
G1791083 NA non-coding downstream 144535 23655255 ~ 23655455 (-)
G1791081 NA non-coding downstream 146536 23652722 ~ 23653454 (-)
G1791068 NA non-coding downstream 172762 23626710 ~ 23627228 (-)
G1791155 NA non-coding upstream 20337 23822379 ~ 23840568 (-)
G1791168 NA non-coding upstream 34690 23836732 ~ 23904072 (-)
G1791153 LOC106582143 non-coding upstream 38850 23840892 ~ 23868836 (-)
G1791206 NA non-coding upstream 127680 23929722 ~ 23930005 (-)
LOC110501997 LOC106582152 other downstream 339630 23368423 ~ 23460589 (-)
G1790280 NA other downstream 630627 23164481 ~ 23169363 (-)
G1789581 NA other downstream 1380492 22418130 ~ 22419498 (-)
LOC110501594 LOC106581696 other downstream 1979045 21788428 ~ 21913721 (-)
G1787166 NA other downstream 3344007 20390516 ~ 20455983 (-)
G1791405 NA other upstream 524687 24326729 ~ 24327127 (-)
G1792342 LOC106582127 other upstream 1046549 24848591 ~ 24849752 (-)
G1792345 NA other upstream 1054782 24856824 ~ 24857885 (-)
G1792433 NA other upstream 1183917 24985959 ~ 24986268 (-)
LOC110501627 LOC106582113 other upstream 1908531 25709599 ~ 25744218 (-)

Expression


Co-expression Network