G1790676


Basic Information

Item Value
gene id G1790676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23845665 ~ 23847029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2049632
ctttttttggtcctccaataatcggtatcggtgttgaaaaatcataatcgatcGACCTCTATCGTTTACTTAACCTTAGTCCCACTTTCTACATCCACTTGGGTTAAACTTATCCTGGGCAGAAATCAATGGCTATATATTGTTTTTTATGActtaacggggggggggtcacgtgAGGTTAGAGGCTGTGTTTGCATAGATGGGACTCTGTTGGGTTGTTTAGGTGAAAGGGGCAGAAATAGTCTCCTGGATGGACAACTGGGATGTTAATGTATAGACACTGTGTGTGACACACATACAGGAGGAGGAATAGAAAGGCAAACTGAATATGTGTGGGTGTGACAGAGGCAACAACTATAGTTAAGATTCTGCTTGATTAACAGTCTTTGTTGAGATATAAAAGAAGTGGTATAAAAGAGGTGACGGTCATTGTTTTTGGTTTAAATTTGTCCTTGTTGTCAAGGTCCTTTGGTAATTTCTTTCCGCATGCACGCATTATACTTTATTACACTTCAATCAATTGTGATTAACTGAAATATATACCCTCTTCTATTCTGTGGCCCTGACCTAAAATTAAGTTATCTGGGCCCTATAGTTATGACAAATAATTTCCTGAATGAATTTAGTTAATTCTTTATAGTAGCTTTACTCAGACTATGACCTTGTGGTCCTATAGTGTGAAGTACTGACCTTCAGAGGTACACCTGTTAGGATACATGTGCAGATAATCTAGTATAATTGAACATTTTCTACccgatatatacagttgaagtcggaagtttacatacttaggttggagtcattaaaactcgtttttcaaccactccacaaatttcttgttaacaaactatagttttggcaagtcggttaggacatctactttgtgcatgacataagtaatttttccaacaattgtttacagacatattatttcacttataattcactgtatcacaattccagtgggtcagaagtttacatacactaagttgactgtgcctttaaacagcatggaaaattccagaaaattatgtcatggctttagagcttctgatagggtaattgacatcatttgagtcaattggaggtgtacctgtggatgtatttcaaggtccaccttcaaactcagtggctctttgcttgacatcatgggaaaatcaaaagaaatcagccaagacctcagaaaaaataattgtagacctccacaagtctggttcatccgtgggagcaatttccaaacgcctgaagataccgcgttcatctgtacaaacaatagtacacaagtataaacacaatggcatgatgcagctgtcata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2049632 True 1316 lncRNA 0.38 3 23845665 23847029

Neighbor

gene id symbol gene type direction distance location
LOC110502012 LOC106582145 coding upstream 45718 23791644 ~ 23799947 (+)
LOC110502002 LOC100195685 coding upstream 132088 23699620 ~ 23713577 (+)
LOC110502031 NA coding upstream 210483 23633163 ~ 23635182 (+)
LOC110502013 tfg coding upstream 655302 23164465 ~ 23190363 (+)
LOC110502028 LOC106586704 coding upstream 684653 23160350 ~ 23161012 (+)
LOC110502009 LOC106582142 coding downstream 34204 23881233 ~ 23901983 (+)
LOC110502003 LOC106582138 coding downstream 109134 23956163 ~ 24023376 (+)
LOC110502017 LOC106582137 coding downstream 237872 24084901 ~ 24118246 (+)
LOC110502026 ube2al coding downstream 278864 24125893 ~ 24137925 (+)
rab20 LOC106582135 coding downstream 301015 24148044 ~ 24157384 (+)
G1790427 NA non-coding upstream 102471 23740562 ~ 23743194 (+)
G1790578 NA non-coding upstream 183591 23661872 ~ 23662074 (+)
G1790576 NA non-coding upstream 190417 23655015 ~ 23655248 (+)
G1790566 NA non-coding upstream 218566 23626743 ~ 23627099 (+)
G1790551 NA non-coding upstream 230462 23604635 ~ 23615203 (+)
G1790693 NA non-coding downstream 58389 23905418 ~ 23905728 (+)
G1790695 NA non-coding downstream 61731 23908760 ~ 23908966 (+)
G1790705 NA non-coding downstream 75936 23922965 ~ 23923194 (+)
G1790709 NA non-coding downstream 83546 23930575 ~ 23947727 (+)
G1790442 LOC106582152 other upstream 413282 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 1846042 21998473 ~ 21999623 (+)
G1788811 LOC106581691 other upstream 1849572 21995364 ~ 21996093 (+)
G1787719 NA other upstream 2709188 21134265 ~ 21136477 (+)
G1786330 NA other upstream 3561094 20283181 ~ 20284571 (+)
G1790805 NA other downstream 271533 24118562 ~ 24119475 (+)
LOC110501605 LOC106582130 other downstream 547039 24394068 ~ 24423067 (+)
G1792040 NA other downstream 995913 24842942 ~ 24843285 (+)
LOC110501609 fam155a other downstream 1001937 24848514 ~ 25013655 (+)
G1792649 NA other downstream 1447517 25294546 ~ 25296557 (+)

Expression


Co-expression Network