G1790693


Basic Information

Item Value
gene id G1790693
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23905418 ~ 23905728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2049649
tttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaatttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattccgccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctggatatgttta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2049649 True 311 lncRNA 0.41 1 23905418 23905728

Neighbor

gene id symbol gene type direction distance location
LOC110502009 LOC106582142 coding upstream 3435 23881233 ~ 23901983 (+)
LOC110502020 LOC106582143 coding upstream 36579 23840898 ~ 23868839 (+)
LOC110502012 LOC106582145 coding upstream 105471 23791644 ~ 23799947 (+)
LOC110502002 LOC100195685 coding upstream 191841 23699620 ~ 23713577 (+)
LOC110502031 NA coding upstream 270236 23633163 ~ 23635182 (+)
LOC110502003 LOC106582138 coding downstream 50435 23956163 ~ 24023376 (+)
LOC110502017 LOC106582137 coding downstream 179173 24084901 ~ 24118246 (+)
LOC110502026 ube2al coding downstream 220165 24125893 ~ 24137925 (+)
rab20 LOC106582135 coding downstream 242316 24148044 ~ 24157384 (+)
LOC110501999 LOC106586666 coding downstream 358603 24264331 ~ 24324757 (+)
G1790676 NA non-coding upstream 58389 23845665 ~ 23847029 (+)
G1790427 NA non-coding upstream 162224 23740562 ~ 23743194 (+)
G1790578 NA non-coding upstream 243344 23661872 ~ 23662074 (+)
G1790576 NA non-coding upstream 250170 23655015 ~ 23655248 (+)
G1790566 NA non-coding upstream 278319 23626743 ~ 23627099 (+)
G1790695 NA non-coding downstream 3032 23908760 ~ 23908966 (+)
G1790705 NA non-coding downstream 17237 23922965 ~ 23923194 (+)
G1790709 NA non-coding downstream 24847 23930575 ~ 23947727 (+)
G1790785 NA non-coding downstream 145152 24050880 ~ 24051163 (+)
G1790442 LOC106582152 other upstream 473035 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 1905795 21998473 ~ 21999623 (+)
G1788811 LOC106581691 other upstream 1909325 21995364 ~ 21996093 (+)
G1787719 NA other upstream 2768941 21134265 ~ 21136477 (+)
G1786330 NA other upstream 3620847 20283181 ~ 20284571 (+)
G1790805 NA other downstream 212834 24118562 ~ 24119475 (+)
LOC110501605 LOC106582130 other downstream 488340 24394068 ~ 24423067 (+)
G1792040 NA other downstream 937214 24842942 ~ 24843285 (+)
LOC110501609 fam155a other downstream 943238 24848514 ~ 25013655 (+)
G1792649 NA other downstream 1388818 25294546 ~ 25296557 (+)

Expression


Co-expression Network