G1791207


Basic Information

Item Value
gene id G1791207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 23930604 ~ 23947305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2050209
ttgcggacctctgtccgaaacgacgtctgacggaaggccatgaattctgaaaacattctcgatgatgatttgtgccgtctctttagcagaaggaagcttagcaaggggaatgaaatgagccgccttagagaacctatcgacaaccgtaagaataacagtcttccccgctgacgaaggcagtccggtgacaaaatctaaggcgatgtgagaccacggtcgagagggaataggaagcggcctgagacggccggcaggaggggagttaccggacttagtctgcgcgcagaccgaacaagcagccacgaaacgacgcgtgtcatgctcccgggtgggccaccaaaaacgctggcgaatggaagcaagcgtaccccgaacgccagggtggccggctaacttggcagagtgagcccactgaagaacggccagacgagtaggaacgggaacgaaaagaaggttcctaggacaagcgcgcggcgacggagtttgagtgagtgcttgctttacctgcctctcaattccccagacagtcaacccgacaacacgcccctcagggagaatcccctcggggtcagtggaggctactgaagaactgaagagacgagataaagcatcaggcttggtgttcttagagcccggacgataagaaatcacgaactcgaaacgagcgaaaaacagcgcccagtgcgcctgacgcgcattaagtcgtttggcagaacggatgtactcaaggttcctatggtcagtccaaacgacaaaaggaacggtcgccccctccaaccactgtcgccattcgcctagggctaagcggatggcgagcagttcgcggtttcccacatcatagttacgttccgacggcgacaggcgatgagaaaaatacgcgcaagggtggaccttgtcgtcagagagggagcgctgagaaagaatggctcccacgcccacctctgacgcgtcaacctcgacaacgaactgtctagtgacatcaggtgtaacaaggataggtgcggatgtaaaacgattcttgaggagatcaaaagctccctgggcggaaacggaccacttaaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2050209 True 1063 lncRNA 0.55 2 23930604 23947305

Neighbor

gene id symbol gene type direction distance location
appb LOC106582144 coding downstream 94957 23803577 ~ 23835647 (-)
LOC110502024 LOC106582147 coding downstream 141991 23776064 ~ 23788613 (-)
LOC110502018 LOC106582148 coding downstream 167484 23738606 ~ 23763120 (-)
LOC110502021 LOC106582149 coding downstream 312556 23607430 ~ 23618048 (-)
LOC110502029 g12 coding downstream 345131 23583447 ~ 23585473 (-)
LOC110502070 NA coding upstream 5270 23951016 ~ 24038256 (-)
LOC110502010 LOC106582139 coding upstream 75082 24022387 ~ 24050582 (-)
LOC110502071 LOC106582043 coding upstream 105957 24053262 ~ 24072305 (-)
LOC110502032 NA coding upstream 134791 24082096 ~ 24085731 (-)
LOC110502019 LOC106582134 coding upstream 191359 24138664 ~ 24141597 (-)
G1791206 NA non-coding downstream 599 23929722 ~ 23930005 (-)
G1791168 NA non-coding downstream 26532 23836732 ~ 23904072 (-)
G1791153 LOC106582143 non-coding downstream 61768 23840892 ~ 23868836 (-)
G1791155 NA non-coding downstream 90036 23822379 ~ 23840568 (-)
G1791293 NA non-coding upstream 88233 24035538 ~ 24036176 (-)
G1791296 NA non-coding upstream 103995 24051300 ~ 24051562 (-)
G1791297 NA non-coding upstream 104308 24051613 ~ 24051828 (-)
G1791301 NA non-coding upstream 126498 24073803 ~ 24074051 (-)
LOC110501997 LOC106582152 other downstream 470244 23368423 ~ 23460589 (-)
G1790280 NA other downstream 761241 23164481 ~ 23169363 (-)
G1789581 NA other downstream 1511106 22418130 ~ 22419498 (-)
LOC110501594 LOC106581696 other downstream 2109659 21788428 ~ 21913721 (-)
G1787166 NA other downstream 3474621 20390516 ~ 20455983 (-)
G1791405 NA other upstream 379424 24326729 ~ 24327127 (-)
G1792342 LOC106582127 other upstream 901286 24848591 ~ 24849752 (-)
G1792345 NA other upstream 909519 24856824 ~ 24857885 (-)
G1792433 NA other upstream 1038654 24985959 ~ 24986268 (-)
LOC110501627 LOC106582113 other upstream 1763268 25709599 ~ 25744218 (-)

Expression


Co-expression Network