Gene
RNA
| Item | Value |
|---|---|
| gene id | G1790785 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 24050880 ~ 24051163 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2049750 | True | 284 | lncRNA | 0.40 | 1 | 24050880 | 24051163 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502003 | LOC106582138 | coding | upstream | 28343 | 23956163 ~ 24023376 (+) |
| LOC110502009 | LOC106582142 | coding | upstream | 148897 | 23881233 ~ 23901983 (+) |
| LOC110502020 | LOC106582143 | coding | upstream | 182041 | 23840898 ~ 23868839 (+) |
| LOC110502012 | LOC106582145 | coding | upstream | 250933 | 23791644 ~ 23799947 (+) |
| LOC110502002 | LOC100195685 | coding | upstream | 337303 | 23699620 ~ 23713577 (+) |
| LOC110502017 | LOC106582137 | coding | downstream | 33738 | 24084901 ~ 24118246 (+) |
| LOC110502026 | ube2al | coding | downstream | 74730 | 24125893 ~ 24137925 (+) |
| rab20 | LOC106582135 | coding | downstream | 96881 | 24148044 ~ 24157384 (+) |
| LOC110501999 | LOC106586666 | coding | downstream | 213168 | 24264331 ~ 24324757 (+) |
| LOC110501605 | LOC106582130 | coding | downstream | 355787 | 24394068 ~ 24423067 (+) |
| G1790709 | NA | non-coding | upstream | 103153 | 23930575 ~ 23947727 (+) |
| G1790705 | NA | non-coding | upstream | 127686 | 23922965 ~ 23923194 (+) |
| G1790695 | NA | non-coding | upstream | 141914 | 23908760 ~ 23908966 (+) |
| G1790693 | NA | non-coding | upstream | 145152 | 23905418 ~ 23905728 (+) |
| G1790814 | NA | non-coding | downstream | 26375 | 24077538 ~ 24077768 (+) |
| G1790825 | NA | non-coding | downstream | 71651 | 24122814 ~ 24123198 (+) |
| G1790801 | NA | non-coding | downstream | 89609 | 24140772 ~ 24141197 (+) |
| G1790803 | NA | non-coding | downstream | 273730 | 24324893 ~ 24325151 (+) |
| G1791414 | NA | non-coding | downstream | 282712 | 24333875 ~ 24334595 (+) |
| G1790442 | LOC106582152 | other | upstream | 618497 | 23416093 ~ 23432383 (+) |
| G1788815 | LOC100136012 | other | upstream | 2051257 | 21998473 ~ 21999623 (+) |
| G1788811 | LOC106581691 | other | upstream | 2054787 | 21995364 ~ 21996093 (+) |
| G1787719 | NA | other | upstream | 2914403 | 21134265 ~ 21136477 (+) |
| G1786330 | NA | other | upstream | 3766309 | 20283181 ~ 20284571 (+) |
| G1790805 | NA | other | downstream | 67399 | 24118562 ~ 24119475 (+) |
| G1792040 | NA | other | downstream | 791779 | 24842942 ~ 24843285 (+) |
| LOC110501609 | fam155a | other | downstream | 797803 | 24848514 ~ 25013655 (+) |
| G1792649 | NA | other | downstream | 1243383 | 25294546 ~ 25296557 (+) |
