G1791461


Basic Information

Item Value
gene id G1791461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 24362246 ~ 24362460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2050495
agattgacatatactaaattcatttttaaacgggtggatttattggtgttaaaatacacaagttatgctattttggaccaccaggctgctgtTGTCATGCAACCTGtagtttgtgtttatactttttcataacgacaatggcaagtttgatgtcggacgacaatagaatgttcatgatgtcactgcgacaactgttgatagatgtagtataaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2050495 True 215 lncRNA 0.36 1 24362246 24362460

Neighbor

gene id symbol gene type direction distance location
LOC110501999 LOC106586666 coding upstream 37489 24264331 ~ 24324757 (+)
rab20 LOC106582135 coding upstream 204862 24148044 ~ 24157384 (+)
LOC110502026 ube2al coding upstream 224321 24125893 ~ 24137925 (+)
LOC110502017 LOC106582137 coding upstream 244000 24084901 ~ 24118246 (+)
LOC110502003 LOC106582138 coding upstream 339709 23956163 ~ 24023376 (+)
LOC110501605 LOC106582130 coding downstream 44490 24394068 ~ 24423067 (+)
LOC110501609 fam155a coding downstream 486054 24848514 ~ 25013655 (+)
LOC110501611 pdzd1 coding downstream 792637 25155097 ~ 25162839 (+)
LOC110501614 ox2g coding downstream 830975 25193435 ~ 25223476 (+)
cfap91 maats1 coding downstream 962771 25325231 ~ 25333857 (+)
G1791460 NA non-coding upstream 99 24361921 ~ 24362147 (+)
G1791450 NA non-coding upstream 4295 24357587 ~ 24357951 (+)
G1791424 NA non-coding upstream 22368 24339199 ~ 24339878 (+)
G1791414 NA non-coding upstream 27651 24333875 ~ 24334595 (+)
G1790803 NA non-coding upstream 37095 24324893 ~ 24325151 (+)
G1791469 NA non-coding downstream 5091 24367551 ~ 24367779 (+)
G1791472 NA non-coding downstream 5776 24368236 ~ 24368439 (+)
G1791493 NA non-coding downstream 18726 24381186 ~ 24381523 (+)
G1791501 NA non-coding downstream 21839 24384299 ~ 24384560 (+)
G1791503 NA non-coding downstream 23439 24385899 ~ 24386221 (+)
G1790805 NA other upstream 242771 24118562 ~ 24119475 (+)
G1790442 LOC106582152 other upstream 929863 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 2362623 21998473 ~ 21999623 (+)
G1788811 LOC106581691 other upstream 2366153 21995364 ~ 21996093 (+)
G1787719 NA other upstream 3225769 21134265 ~ 21136477 (+)
G1792040 NA other downstream 480482 24842942 ~ 24843285 (+)
G1792649 NA other downstream 932086 25294546 ~ 25296557 (+)
G1793045 NA other downstream 1368866 25731326 ~ 25731754 (+)

Expression


Co-expression Network