Gene
RNA
| Item | Value |
|---|---|
| gene id | G1792433 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 24985959 ~ 24986268 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2051516 | True | 310 | TUCP | 0.61 | 1 | 24985959 | 24986268 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501608 | LOC106582128 | coding | downstream | 200957 | 24779405 ~ 24785002 (-) |
| tnfsf13b | tnfsf13b | coding | downstream | 207024 | 24774718 ~ 24778935 (-) |
| LOC110502073 | myo16 | coding | downstream | 230109 | 24519574 ~ 24755850 (-) |
| LOC110501998 | LOC106582131 | coding | downstream | 721672 | 24157993 ~ 24264287 (-) |
| naxd | LOC106582132 | coding | downstream | 837973 | 24141838 ~ 24147986 (-) |
| LOC110501610 | LOC106582126 | coding | upstream | 113173 | 25099441 ~ 25149856 (-) |
| LOC110501612 | LOC107389858 | coding | upstream | 176921 | 25163189 ~ 25176805 (-) |
| LOC118943630 | NA | coding | upstream | 244993 | 25231261 ~ 25234195 (-) |
| LOC110501615 | LOC106582053 | coding | upstream | 287600 | 25273868 ~ 25278632 (-) |
| LOC110501616 | LOC106582122 | coding | upstream | 315551 | 25299369 ~ 25311767 (-) |
| G1792429 | NA | non-coding | downstream | 8752 | 24976701 ~ 24977207 (-) |
| G1792428 | NA | non-coding | downstream | 9297 | 24976223 ~ 24976662 (-) |
| G1792422 | NA | non-coding | downstream | 14665 | 24971061 ~ 24971294 (-) |
| G1792419 | NA | non-coding | downstream | 16169 | 24969579 ~ 24969790 (-) |
| G1792418 | NA | non-coding | downstream | 16937 | 24968645 ~ 24969022 (-) |
| G1792446 | NA | non-coding | upstream | 17455 | 25003723 ~ 25003947 (-) |
| G1792448 | NA | non-coding | upstream | 25332 | 25011600 ~ 25013698 (-) |
| G1792462 | NA | non-coding | upstream | 49059 | 25035327 ~ 25035791 (-) |
| G1792509 | NA | non-coding | upstream | 106000 | 25092268 ~ 25094151 (-) |
| G1792471 | NA | non-coding | upstream | 109224 | 25095492 ~ 25096562 (-) |
| G1792345 | NA | other | downstream | 128074 | 24856824 ~ 24857885 (-) |
| G1792342 | LOC106582127 | other | downstream | 136207 | 24848591 ~ 24849752 (-) |
| G1791405 | NA | other | downstream | 658832 | 24326729 ~ 24327127 (-) |
| LOC110501997 | LOC106582152 | other | downstream | 1525599 | 23368423 ~ 23460589 (-) |
| G1790280 | NA | other | downstream | 1816596 | 23164481 ~ 23169363 (-) |
| LOC110501627 | LOC106582113 | other | upstream | 724305 | 25709599 ~ 25744218 (-) |
| G1794978 | NA | other | upstream | 2282394 | 27268662 ~ 27286095 (-) |
| LOC110501685 | LOC106582064 | other | upstream | 2755104 | 27741372 ~ 27770708 (-) |
| G1795850 | NA | other | upstream | 2994396 | 27980664 ~ 27981379 (-) |
| LOC110501691 | LOC106582059 | other | upstream | 3023387 | 28009421 ~ 28019116 (-) |
