G1792471


Basic Information

Item Value
gene id G1792471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25095492 ~ 25096562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2051556
gcgtcagctggagtggtgtaaagctggctgccattggactctggagcagtggaaatgcgttcctggagtgatgaatcacgctttaccatctggcagtccaatggacaaatctggatttggcggatgcctggagaatgctacctgccccaatgcatagtgccaactgtaaagtttggtggaggaggaacaatggtctggggctgtttttcatggttcgggctacgcccctttgttccagtgaagggaaatcttaacgctacagcataaccttacattctagacgattccgtGCATcctactttgtggcaacagtttgggaaaggccctctcctgtttcagcatgacaataccaccgtgcacaaagcgaggtccatacagaaatggtttgtcgagatcagtgtgaaaAAACTTGACAGGCCtaaacagagccctgacctcaaccccatcaaacacctttgggatgaattggaatgccgactgcaagacaggcctaatcgcccaacatcaacgcccaacctcactaatgctctcatGGCTGAAtcgaagcaagtccctgcagcaatgttccaacatctagtggaaagccgttccagaagagtgaaggctgttatagcagcaaagaggggaccaactccatattaatgcccatgattttgtaatgagatgttcgacgagcagctgtccacatactcCGATCATTATACACATTATAAACTCTTCCAATGTGCTGTAGACTGAACAGCCTGAGGAAGCGAATAGGAAGAAAACATAGTAGAAGTCCTCTAAAGGTTAGTGATAATGCAGGACTTGATTTCATATGGGAAAGCTATTAGAATAATATCCTTAGAAAAGGTCagtgtctgacacacacacaaaacaagacGCAATTCATTTGGTCCTCACAGTGGCATTTAAGTGCACCAAAAACACAGGATATGTCCGGTCAGACCCACTGTCACAGGGATTCGACAGATTCACAAACAATTTGCCCTTTATTATTTTCAGAAGTGAACAAAGGAAATGAAAATGACACCGAAAGTCATTTgcatgtacacacgcacacacacacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2051556 True 1071 lncRNA 0.46 1 25095492 25096562

Neighbor

gene id symbol gene type direction distance location
LOC110501608 LOC106582128 coding downstream 310490 24779405 ~ 24785002 (-)
tnfsf13b tnfsf13b coding downstream 316557 24774718 ~ 24778935 (-)
LOC110502073 myo16 coding downstream 339642 24519574 ~ 24755850 (-)
LOC110501998 LOC106582131 coding downstream 831205 24157993 ~ 24264287 (-)
naxd LOC106582132 coding downstream 947506 24141838 ~ 24147986 (-)
LOC110501610 LOC106582126 coding upstream 2879 25099441 ~ 25149856 (-)
LOC110501612 LOC107389858 coding upstream 66627 25163189 ~ 25176805 (-)
LOC118943630 NA coding upstream 134699 25231261 ~ 25234195 (-)
LOC110501615 LOC106582053 coding upstream 177306 25273868 ~ 25278632 (-)
LOC110501616 LOC106582122 coding upstream 205257 25299369 ~ 25311767 (-)
G1792509 NA non-coding downstream 1341 25092268 ~ 25094151 (-)
G1792462 NA non-coding downstream 59701 25035327 ~ 25035791 (-)
G1792448 NA non-coding downstream 81794 25011600 ~ 25013698 (-)
G1792446 NA non-coding downstream 91545 25003723 ~ 25003947 (-)
G1792429 NA non-coding downstream 118285 24976701 ~ 24977207 (-)
G1792514 NA non-coding upstream 8958 25105520 ~ 25105755 (-)
G1792530 NA non-coding upstream 32909 25129471 ~ 25130521 (-)
G1792531 NA non-coding upstream 38618 25135180 ~ 25135579 (-)
G1792433 NA other downstream 109224 24985959 ~ 24986268 (-)
G1792345 NA other downstream 237607 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 245740 24848591 ~ 24849752 (-)
G1791405 NA other downstream 768365 24326729 ~ 24327127 (-)
LOC110501997 LOC106582152 other downstream 1635132 23368423 ~ 23460589 (-)
LOC110501627 LOC106582113 other upstream 614011 25709599 ~ 25744218 (-)
G1794978 NA other upstream 2172100 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 2644810 27741372 ~ 27770708 (-)
G1795850 NA other upstream 2884102 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 2913093 28009421 ~ 28019116 (-)

Expression


Co-expression Network