G1792252


Basic Information

Item Value
gene id G1792252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25133020 ~ 25133328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2051325
gccttttgGAACATacaaactttcatgtgccttattaATTAACAAACGTGTAtttcatctgtaaatatgaatacaattgttaactTAGGAGCCAAGTTGGTTTAGACACAGAAaatacaggaaccttcccgctagccatgattggctgagataatggatgggctggacatgccgagagtttggattggtctgccatgtagcatgcttctgtctataatgtgagctgttcagtatgtgttgataGTCCTTTCTACTGTGccgtttttgaaagatataacatCAGACATTGTGAACAAAAAAGgttttgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2051325 True 309 lncRNA 0.39 1 25133020 25133328

Neighbor

gene id symbol gene type direction distance location
LOC110501609 fam155a coding upstream 124627 24848514 ~ 25013655 (+)
LOC110501605 LOC106582130 coding upstream 709953 24394068 ~ 24423067 (+)
LOC110501999 LOC106586666 coding upstream 808263 24264331 ~ 24324757 (+)
rab20 LOC106582135 coding upstream 975636 24148044 ~ 24157384 (+)
LOC110502026 ube2al coding upstream 995095 24125893 ~ 24137925 (+)
LOC110501611 pdzd1 coding downstream 21769 25155097 ~ 25162839 (+)
LOC110501614 ox2g coding downstream 60107 25193435 ~ 25223476 (+)
cfap91 maats1 coding downstream 191903 25325231 ~ 25333857 (+)
LOC118943581 NA coding downstream 268151 25401479 ~ 25407741 (+)
LOC110502118 LOC106582051 coding downstream 431340 25564668 ~ 25587687 (+)
G1792240 LOC106582126 non-coding upstream 19122 25113664 ~ 25113898 (+)
G1792236 NA non-coding upstream 23198 25109555 ~ 25109822 (+)
G1792235 LOC106582126 non-coding upstream 23600 25109157 ~ 25109420 (+)
G1792232 NA non-coding upstream 25633 25107159 ~ 25107387 (+)
G1792226 LOC106582126 non-coding upstream 31381 25100850 ~ 25101639 (+)
G1792260 NA non-coding downstream 9919 25143247 ~ 25143448 (+)
G1792265 NA non-coding downstream 16366 25149694 ~ 25150195 (+)
G1792271 NA non-coding downstream 33122 25166450 ~ 25167906 (+)
G1792280 NA non-coding downstream 41537 25174865 ~ 25175168 (+)
G1792284 NA non-coding downstream 47441 25180769 ~ 25180969 (+)
G1792040 NA other upstream 289735 24842942 ~ 24843285 (+)
G1790805 NA other upstream 1013545 24118562 ~ 24119475 (+)
G1790442 LOC106582152 other upstream 1700637 23416093 ~ 23432383 (+)
G1792649 NA other downstream 161218 25294546 ~ 25296557 (+)
G1793045 NA other downstream 597998 25731326 ~ 25731754 (+)
G1793717 NA other downstream 1182498 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2770254 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2903600 28036917 ~ 28052019 (+)

Expression


Co-expression Network