Gene
RNA
| Item | Value |
|---|---|
| gene id | G1792531 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 25135180 ~ 25135579 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2051625 | True | 400 | lncRNA | 0.50 | 1 | 25135180 | 25135579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501608 | LOC106582128 | coding | downstream | 350178 | 24779405 ~ 24785002 (-) |
| tnfsf13b | tnfsf13b | coding | downstream | 356245 | 24774718 ~ 24778935 (-) |
| LOC110502073 | myo16 | coding | downstream | 379330 | 24519574 ~ 24755850 (-) |
| LOC110501998 | LOC106582131 | coding | downstream | 870893 | 24157993 ~ 24264287 (-) |
| naxd | LOC106582132 | coding | downstream | 987194 | 24141838 ~ 24147986 (-) |
| LOC110501612 | LOC107389858 | coding | upstream | 27610 | 25163189 ~ 25176805 (-) |
| LOC118943630 | NA | coding | upstream | 95682 | 25231261 ~ 25234195 (-) |
| LOC110501615 | LOC106582053 | coding | upstream | 138289 | 25273868 ~ 25278632 (-) |
| LOC110501616 | LOC106582122 | coding | upstream | 166240 | 25299369 ~ 25311767 (-) |
| gsk3ba | LOC106586650 | coding | upstream | 209097 | 25344651 ~ 25387478 (-) |
| G1792530 | NA | non-coding | downstream | 4659 | 25129471 ~ 25130521 (-) |
| G1792514 | NA | non-coding | downstream | 29425 | 25105520 ~ 25105755 (-) |
| LOC110501610 | LOC106582126 | non-coding | downstream | 33793 | 25099441 ~ 25149856 (-) |
| G1792471 | NA | non-coding | downstream | 38618 | 25095492 ~ 25096562 (-) |
| G1792509 | NA | non-coding | downstream | 41029 | 25092268 ~ 25094151 (-) |
| G1792557 | NA | non-coding | upstream | 31844 | 25167423 ~ 25167652 (-) |
| G1792571 | NA | non-coding | upstream | 55578 | 25191157 ~ 25191361 (-) |
| G1792525 | NA | non-coding | upstream | 86286 | 25221865 ~ 25265798 (-) |
| G1792433 | NA | other | downstream | 148912 | 24985959 ~ 24986268 (-) |
| G1792345 | NA | other | downstream | 277295 | 24856824 ~ 24857885 (-) |
| G1792342 | LOC106582127 | other | downstream | 285428 | 24848591 ~ 24849752 (-) |
| G1791405 | NA | other | downstream | 808053 | 24326729 ~ 24327127 (-) |
| LOC110501997 | LOC106582152 | other | downstream | 1674820 | 23368423 ~ 23460589 (-) |
| LOC110501627 | LOC106582113 | other | upstream | 574994 | 25709599 ~ 25744218 (-) |
| G1794978 | NA | other | upstream | 2133083 | 27268662 ~ 27286095 (-) |
| LOC110501685 | LOC106582064 | other | upstream | 2605793 | 27741372 ~ 27770708 (-) |
| G1795850 | NA | other | upstream | 2845085 | 27980664 ~ 27981379 (-) |
| LOC110501691 | LOC106582059 | other | upstream | 2874076 | 28009421 ~ 28019116 (-) |
