G1792260


Basic Information

Item Value
gene id G1792260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25143247 ~ 25143448 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2051333
GTATAATACAGTCAAATGTACGGAATTGTACTCTGTGTCACTACACAGTACTTGCTTTGATACTGTATTACGATTACAGTAGGTATACTGTAAAATGAAATACAGTAACTTACTTGCGAATTAGCTGCCTATAAATTACTGTCAAATTCACAGCATAACTCTGCAAATTCACAGTGATGTGATAGACCACCTCCATTAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2051333 True 202 lncRNA 0.36 1 25143247 25143448

Neighbor

gene id symbol gene type direction distance location
LOC110501609 fam155a coding upstream 134854 24848514 ~ 25013655 (+)
LOC110501605 LOC106582130 coding upstream 720180 24394068 ~ 24423067 (+)
LOC110501999 LOC106586666 coding upstream 818490 24264331 ~ 24324757 (+)
rab20 LOC106582135 coding upstream 985863 24148044 ~ 24157384 (+)
LOC110502026 ube2al coding upstream 1005322 24125893 ~ 24137925 (+)
LOC110501611 pdzd1 coding downstream 11649 25155097 ~ 25162839 (+)
LOC110501614 ox2g coding downstream 49987 25193435 ~ 25223476 (+)
cfap91 maats1 coding downstream 181783 25325231 ~ 25333857 (+)
LOC118943581 NA coding downstream 258031 25401479 ~ 25407741 (+)
LOC110502118 LOC106582051 coding downstream 421220 25564668 ~ 25587687 (+)
G1792252 NA non-coding upstream 9919 25133020 ~ 25133328 (+)
G1792240 LOC106582126 non-coding upstream 29349 25113664 ~ 25113898 (+)
G1792236 NA non-coding upstream 33425 25109555 ~ 25109822 (+)
G1792235 LOC106582126 non-coding upstream 33827 25109157 ~ 25109420 (+)
G1792232 NA non-coding upstream 35860 25107159 ~ 25107387 (+)
G1792265 NA non-coding downstream 6246 25149694 ~ 25150195 (+)
G1792271 NA non-coding downstream 23002 25166450 ~ 25167906 (+)
G1792280 NA non-coding downstream 31417 25174865 ~ 25175168 (+)
G1792284 NA non-coding downstream 37321 25180769 ~ 25180969 (+)
G1792289 NA non-coding downstream 42130 25185578 ~ 25185861 (+)
G1792040 NA other upstream 299962 24842942 ~ 24843285 (+)
G1790805 NA other upstream 1023772 24118562 ~ 24119475 (+)
G1790442 LOC106582152 other upstream 1710864 23416093 ~ 23432383 (+)
G1792649 NA other downstream 151098 25294546 ~ 25296557 (+)
G1793045 NA other downstream 587878 25731326 ~ 25731754 (+)
G1793717 NA other downstream 1172378 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2760134 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2893480 28036917 ~ 28052019 (+)

Expression


Co-expression Network