G1792289


Basic Information

Item Value
gene id G1792289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25185578 ~ 25185861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2051366
CTTATAAATCATAACAATTTTTATCAAAATACAGCTGTAGACAGAAGTCAAAGatcaaacatcacacatacaaCTGATGTCTCTCCTGAGTTCTGCAAAATAGGAAAAGTCCCAAGTTGCTTTTATCATGCTTGCAGTCAAACCCCTGTGATGTGACTGCCTACATCATTaccttctactcatgagaccaagcCCATGCATCCACAGCTATACAAACATAATTTCAGTGTTATCTAAAGGCTTAGCAGTAAATGTCCACTCCTCAAGTTGATTTATAGTGGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2051366 True 284 lncRNA 0.37 1 25185578 25185861

Neighbor

gene id symbol gene type direction distance location
LOC110501611 pdzd1 coding upstream 22739 25155097 ~ 25162839 (+)
LOC110501609 fam155a coding upstream 177185 24848514 ~ 25013655 (+)
LOC110501605 LOC106582130 coding upstream 762511 24394068 ~ 24423067 (+)
LOC110501999 LOC106586666 coding upstream 860821 24264331 ~ 24324757 (+)
rab20 LOC106582135 coding upstream 1028194 24148044 ~ 24157384 (+)
LOC110501614 ox2g coding downstream 7574 25193435 ~ 25223476 (+)
cfap91 maats1 coding downstream 139370 25325231 ~ 25333857 (+)
LOC118943581 NA coding downstream 215618 25401479 ~ 25407741 (+)
LOC110502118 LOC106582051 coding downstream 378807 25564668 ~ 25587687 (+)
LOC110501624 LOC106582115 coding downstream 433317 25619178 ~ 25651263 (+)
G1792284 NA non-coding upstream 4609 25180769 ~ 25180969 (+)
G1792280 NA non-coding upstream 10410 25174865 ~ 25175168 (+)
G1792271 NA non-coding upstream 17672 25166450 ~ 25167906 (+)
G1792265 NA non-coding upstream 35383 25149694 ~ 25150195 (+)
G1792260 NA non-coding upstream 42130 25143247 ~ 25143448 (+)
G1792290 NA non-coding downstream 1143 25187004 ~ 25187208 (+)
G1792294 NA non-coding downstream 5685 25191546 ~ 25191786 (+)
G1792653 NA non-coding downstream 117665 25303526 ~ 25306912 (+)
G1792652 LOC106582122 non-coding downstream 122099 25307960 ~ 25309055 (+)
G1792647 NA non-coding downstream 158818 25344679 ~ 25361506 (+)
G1792040 NA other upstream 342293 24842942 ~ 24843285 (+)
G1790805 NA other upstream 1066103 24118562 ~ 24119475 (+)
G1790442 LOC106582152 other upstream 1753195 23416093 ~ 23432383 (+)
G1792649 NA other downstream 108685 25294546 ~ 25296557 (+)
G1793045 NA other downstream 545465 25731326 ~ 25731754 (+)
G1793717 NA other downstream 1129965 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2717721 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2851067 28036917 ~ 28052019 (+)

Expression


Co-expression Network