G1792979


Basic Information

Item Value
gene id G1792979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25601801 ~ 25644871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2052121
agtcttatggcttgggggtaaaaactgttgagaagcCttttggtaccgcttgccatgtggtagtagagagaacagtctatgactggggtggctttgtcgtgcccttttcacgactgtcttggtgtgtttggaccattctagtttgttggtgatgtggacaccaaagaacttgaagctctcaacttgctccactacagccctgtcaatgagaatgggggcgtgctcggtcctccttttcctgtagtccataatcatctccttagtcttagttacattgagggagaggttgttattctggcaccacccggcgaGGTCTCTGAactccctataggctgtatcTTCATTGTCGGagatcaggcctaacactgttgtgtcgtcagcaaacgtaatgatggtgttggagtcgtgcctggccaggCAGTCacaggtgaacagggagtacaggaggggactgagcacgcacccctgaggggctccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2052121 True 479 lncRNA 0.51 2 25601801 25644871

Neighbor

gene id symbol gene type direction distance location
LOC110502118 LOC106582051 coding upstream 14114 25564668 ~ 25587687 (+)
LOC118943581 NA coding upstream 194060 25401479 ~ 25407741 (+)
cfap91 maats1 coding upstream 267944 25325231 ~ 25333857 (+)
LOC110501614 ox2g coding upstream 378325 25193435 ~ 25223476 (+)
LOC110501611 pdzd1 coding upstream 438962 25155097 ~ 25162839 (+)
LOC110501626 LOC106582114 coding downstream 31166 25676037 ~ 25695731 (+)
LOC110501629 ppa6 coding downstream 58025 25702896 ~ 25708893 (+)
LOC110501634 LOC106582107 coding downstream 262972 25907843 ~ 25914106 (+)
LOC110501637 LOC106582050 coding downstream 278561 25923432 ~ 25926978 (+)
LOC100301670 LOC100301670 coding downstream 289107 25933978 ~ 25940120 (+)
G1792941 NA non-coding upstream 55727 25545871 ~ 25546074 (+)
G1792712 NA non-coding upstream 155181 25398662 ~ 25446620 (+)
G1792728 NA non-coding upstream 167074 25424834 ~ 25434727 (+)
G1792726 NA non-coding upstream 174623 25425280 ~ 25427178 (+)
G1792647 NA non-coding upstream 240295 25344679 ~ 25361506 (+)
G1793014 NA non-coding downstream 7496 25652367 ~ 25652905 (+)
G1793018 NA non-coding downstream 14323 25659194 ~ 25659418 (+)
G1793021 NA non-coding downstream 17112 25661983 ~ 25662213 (+)
G1792968 NA non-coding downstream 20188 25665059 ~ 25700870 (+)
G1792971 NA non-coding downstream 64780 25709651 ~ 25710486 (+)
G1792649 NA other upstream 305244 25294546 ~ 25296557 (+)
LOC110501609 fam155a other upstream 588146 24848514 ~ 25013655 (+)
G1792040 NA other upstream 758516 24842942 ~ 24843285 (+)
LOC110501605 LOC106582130 other upstream 1191088 24394068 ~ 24423067 (+)
G1790805 NA other upstream 1482326 24118562 ~ 24119475 (+)
G1793045 NA other downstream 86455 25731326 ~ 25731754 (+)
G1793717 NA other downstream 670955 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2258711 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2392057 28036917 ~ 28052019 (+)
G1795550 NA other downstream 2446694 28091565 ~ 28092116 (+)

Expression


Co-expression Network