Gene
RNA
| Item | Value |
|---|---|
| gene id | G1793374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 25733072 ~ 25733526 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2052544 | True | 455 | lncRNA | 0.38 | 1 | 25733072 | 25733526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501625 | LOC106582042 | coding | downstream | 74707 | 25653479 ~ 25658365 (-) |
| LOC110501623 | fstl1 | coding | downstream | 229221 | 25445076 ~ 25503851 (-) |
| LOC110501622 | lrrc58 | coding | downstream | 288969 | 25425372 ~ 25444103 (-) |
| LOC110501620 | gpr156 | coding | downstream | 316732 | 25389774 ~ 25416340 (-) |
| LOC110501630 | LOC106582112 | coding | upstream | 36407 | 25769933 ~ 25789301 (-) |
| LOC110501631 | LOC106582111 | coding | upstream | 58292 | 25791818 ~ 25799792 (-) |
| LOC110501632 | LOC106582041 | coding | upstream | 81295 | 25814821 ~ 25842967 (-) |
| LOC110501633 | LOC106582109 | coding | upstream | 110970 | 25844496 ~ 25891165 (-) |
| LOC110501636 | LOC100194724 | coding | upstream | 164234 | 25897760 ~ 25904394 (-) |
| LOC110501627 | LOC106582113 | non-coding | downstream | 22562 | 25709599 ~ 25744218 (-) |
| G1793339 | NA | non-coding | downstream | 56602 | 25676063 ~ 25676470 (-) |
| G1793311 | NA | non-coding | downstream | 83781 | 25648501 ~ 25649291 (-) |
| gsk3ba | LOC106586650 | non-coding | downstream | 371878 | 25344651 ~ 25387478 (-) |
| G1792801 | NA | non-coding | downstream | 421009 | 25311816 ~ 25312063 (-) |
| G1793375 | NA | non-coding | upstream | 576 | 25734102 ~ 25734356 (-) |
| G1793376 | NA | non-coding | upstream | 3527 | 25737053 ~ 25737347 (-) |
| G1793377 | NA | non-coding | upstream | 4003 | 25737529 ~ 25737788 (-) |
| G1793380 | NA | non-coding | upstream | 7175 | 25740701 ~ 25741033 (-) |
| G1793361 | NA | non-coding | upstream | 72891 | 25806417 ~ 25807803 (-) |
| G1792433 | NA | other | downstream | 746804 | 24985959 ~ 24986268 (-) |
| G1792345 | NA | other | downstream | 875187 | 24856824 ~ 24857885 (-) |
| G1792342 | LOC106582127 | other | downstream | 883320 | 24848591 ~ 24849752 (-) |
| G1791405 | NA | other | downstream | 1405945 | 24326729 ~ 24327127 (-) |
| G1794978 | NA | other | upstream | 1535136 | 27268662 ~ 27286095 (-) |
| LOC110501685 | LOC106582064 | other | upstream | 2007846 | 27741372 ~ 27770708 (-) |
| G1795850 | NA | other | upstream | 2247138 | 27980664 ~ 27981379 (-) |
| LOC110501691 | LOC106582059 | other | upstream | 2276129 | 28009421 ~ 28019116 (-) |
| G1796204 | NA | other | upstream | 2600698 | 28334224 ~ 28334621 (-) |
