G1793053


Basic Information

Item Value
gene id G1793053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25744287 ~ 25767762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2052198
GTCAGGTCTATGTGCCAGTGAGAATGTAACTGTCGGAGAAGGGGACAAGAAATGCCGTCTCAAGACAGAAAACGGatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaactcccttcaaagattttctatggggttgagatctggagactggctaggccagtggctgaatgacgacatggatattcagctagtgggatatacgctgcaccggcaggatagaacagcacactccg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2052198 True 256 lncRNA 0.50 2 25744287 25767762

Neighbor

gene id symbol gene type direction distance location
LOC110501629 ppa6 coding upstream 35394 25702896 ~ 25708893 (+)
LOC110501626 LOC106582114 coding upstream 48556 25676037 ~ 25695731 (+)
LOC110501624 LOC106582115 coding upstream 93024 25619178 ~ 25651263 (+)
LOC110502118 LOC106582051 coding upstream 156600 25564668 ~ 25587687 (+)
LOC118943581 NA coding upstream 336546 25401479 ~ 25407741 (+)
LOC110501634 LOC106582107 coding downstream 140081 25907843 ~ 25914106 (+)
LOC110501637 LOC106582050 coding downstream 155670 25923432 ~ 25926978 (+)
LOC100301670 LOC100301670 coding downstream 166216 25933978 ~ 25940120 (+)
LOC110502075 NA coding downstream 263725 26031487 ~ 26035739 (+)
LOC110501640 LOC106582103 coding downstream 286268 26054030 ~ 26062493 (+)
G1793052 NA non-coding upstream 39 25743896 ~ 25744248 (+)
G1793050 NA non-coding upstream 6773 25737190 ~ 25737514 (+)
G1793049 NA non-coding upstream 8473 25733993 ~ 25735814 (+)
G1793048 NA non-coding upstream 10828 25733061 ~ 25733459 (+)
G1793047 NA non-coding upstream 11346 25732672 ~ 25732941 (+)
G1793063 NA non-coding downstream 38715 25806477 ~ 25806652 (+)
G1793065 NA non-coding downstream 40668 25808430 ~ 25809264 (+)
G1793121 LOC106582109 non-coding downstream 75541 25843303 ~ 25845963 (+)
G1793136 NA non-coding downstream 104927 25872689 ~ 25909831 (+)
G1793142 LOC100194724 non-coding downstream 129998 25897760 ~ 25904054 (+)
G1793045 NA other upstream 12533 25731326 ~ 25731754 (+)
G1792649 NA other upstream 447730 25294546 ~ 25296557 (+)
LOC110501609 fam155a other upstream 730632 24848514 ~ 25013655 (+)
G1792040 NA other upstream 901002 24842942 ~ 24843285 (+)
LOC110501605 LOC106582130 other upstream 1333574 24394068 ~ 24423067 (+)
G1793717 NA other downstream 548064 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2135820 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2269166 28036917 ~ 28052019 (+)
G1795550 NA other downstream 2323803 28091565 ~ 28092116 (+)
LOC110502085 LOC106582160 other downstream 3210128 28977890 ~ 28984226 (+)

Expression


Co-expression Network