G1793356


Basic Information

Item Value
gene id G1793356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25811335 ~ 25813715 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2052525
gctgtaacgtaacaaaatgtgggaaaagtcaaggggtctgaatactttccgaatgcactgagtatacaaaacattaagaacatctgctctttccgtTACATAGACTGTCCAGGTGAATCTAGGTGTAAGGTATGATCCCTTCTTGATTtcagttgttaaatccactttgtttattgtagatgaaggggagaagacaggttaaagaaggatttttagccttgagacaattgagatatagattgtgtatgtgtgccattcagagagaggggggggggggtgttcctattaggaaggtattcctaatgttttgtatactttttaaaaACGTTTATTTTGTTCCATGACCATGGTGGTGTTGTGGAAATTCTTGCACAGGGACACTCTAGGTCAATCtggtagctggttgagagaacgcctaGAGcgtgcaaggctgtcatcaaggcaaagggtggctattagaagaatctcaaatataaaatatattttgatttgtttaacacttttttggttacaacatgattccatatgtgttatttcatagttttgatgtcttcactattattctacaatgtagaaaatagtaaaaataaagaaaaaccccagaatgagtaggtgttctaaaacttttgaccggtagtgtacatgaAACTCCACTGATGAGACATGTTATCGTCATATAATCAAAATGAGTCATGTTACCCTCAGAGGTGTTATCCTTGTTACAAATCGAGACATGTAATCTAAACATGTTTTCCTTGTTACTAATCGAGACATCCCCTGAGACATGATGTCTCTTAAGAGATTTCTGACACATGTTAACCTCTACTGTAGATAACGTTATAGATCAGCTCACACAGAACTGGCAAACTCAGCTCACATTCACTCCATATTCACACTTACTAGTCCCCTGACAGCTCTCATTCACTAAATACTTAATAGCTCAATTTCAATCCTCTTATTGTCCAAATTTCAATCAGCTTATTATCCAGATGTCAATCTTAATACTAATCATTTCAATATATTTCTTATCCACATTTCTATCAGCTTGATATCAAATTTCAAACTTATTATCCAAATTTCAGTTTAATATGTAATTTCTCAAAATCACACAACTTTCACATTCACCTAGTACTATTACCCATGTGCATCTTCAACGATTCTCTTGTCATTACTTGCTATACACCTTATGTATCGTCAACGGTTCTCTTGCCACTACTTGCTTTACATATAAATAACACCCTATATTCAAAAATGCCTTGTGTTATTTTGTAGTGGCTGCTGACCACATAGACATTTCTTCTAAATGCCTAGAGTCAGCTGTCAGCGGGGCTTTCCATGGTACCGTCACGCCCTCGTCCTAGTTCTCATAAGACTTGTAAATAGCCTCCTCTCTATAAGACTGGGTACCTTTTTTATGTGTTACTCGCCTTGATTTTATTCTTCATCATTTATTTTTAtactaatttatttaaattgacttacCAGTTGCCGTCCCTCAATTGTTTGTAAATAATGTGTCTCCTCCTGGGCAGCTCAcagccaaattcaaattaaattataaaaatatttcattttcatgaaatcacaagtgcaatatagcaaaacacagattagcttgttgttaatccccctggtgtgtcagatttcaataaagcttttcggtgaaagcataccaagcgtttatgtaagaacatctctctcagtagacaaaatattacaaacagctagcagccaagtagattggtcacgaaagtcagaagagcaataaattaaatcacttaccttggatgaacttcggatgtttgcactcaccagactcccagttacacaataaatgttccttttgttccataaagattattttatatccaaaatacctccatttgtttggcgcgttatgttcagaaatccacaggctcgagggGTTCCGACGTGATGggttctttctcgctcatttttcaaaataaaagcctgaaactatgtctaaagactgttcacaccttgaggaagccataggaaaaggaatctggttgatataccTTTAAATGGAGgtaaggcatccaatggaacagagagctttcaggaaaaacagcacttccttgttggattttcctcaggttttcgcctgcaatatcagttctgttatactcacagacaatatttggacagttttggaaactttagagtgttttctatcctaatctgacaattatatgcatattctagtttcttggcctgagaaataggcagtttcaaatgggtaccgATAGgcagaaataggcagtttcaaaatactgccccctacactcaagaagttatgggtggaatgttattataAGTGTAattttgggatgcaaactcaaaataaaatacattttaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2052525 True 2381 lncRNA 0.37 1 25811335 25813715

Neighbor

gene id symbol gene type direction distance location
LOC110501631 LOC106582111 coding downstream 11543 25791818 ~ 25799792 (-)
LOC110501630 LOC106582112 coding downstream 22034 25769933 ~ 25789301 (-)
LOC110501627 LOC106582113 coding downstream 67117 25709599 ~ 25744218 (-)
LOC110501625 LOC106582042 coding downstream 152970 25653479 ~ 25658365 (-)
LOC110501623 fstl1 coding downstream 307484 25445076 ~ 25503851 (-)
LOC110501632 LOC106582041 coding upstream 1106 25814821 ~ 25842967 (-)
LOC110501633 LOC106582109 coding upstream 30781 25844496 ~ 25891165 (-)
LOC110501636 LOC100194724 coding upstream 84045 25897760 ~ 25904394 (-)
LOC110501638 LOC106582105 coding upstream 131418 25945133 ~ 26001224 (-)
LOC110501639 LOC106582104 coding upstream 197226 26010941 ~ 26013975 (-)
G1793361 NA non-coding downstream 3532 25806417 ~ 25807803 (-)
G1793380 NA non-coding downstream 70302 25740701 ~ 25741033 (-)
G1793377 NA non-coding downstream 73547 25737529 ~ 25737788 (-)
G1793376 NA non-coding downstream 73988 25737053 ~ 25737347 (-)
G1793375 NA non-coding downstream 76979 25734102 ~ 25734356 (-)
G1793433 NA non-coding upstream 105555 25919270 ~ 25919512 (-)
G1793593 NA non-coding upstream 306870 26120585 ~ 26120802 (-)
G1793594 NA non-coding upstream 307663 26121378 ~ 26121658 (-)
LOC110501642 LOC106582101 non-coding upstream 310553 26123770 ~ 26224797 (-)
G1793720 NA non-coding upstream 315816 26129531 ~ 26129770 (-)
G1792433 NA other downstream 825067 24985959 ~ 24986268 (-)
G1792345 NA other downstream 953450 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 961583 24848591 ~ 24849752 (-)
G1791405 NA other downstream 1484208 24326729 ~ 24327127 (-)
G1794978 NA other upstream 1454947 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 1927657 27741372 ~ 27770708 (-)
G1795850 NA other upstream 2166949 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 2195940 28009421 ~ 28019116 (-)
G1796204 NA other upstream 2520509 28334224 ~ 28334621 (-)

Expression


Co-expression Network