Gene
RNA
| Item | Value |
|---|---|
| gene id | G1793201 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 25981589 ~ 26000950 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2052366 | True | 451 | lncRNA | 0.52 | 2 | 25981589 | 26000950 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100301670 | LOC100301670 | coding | upstream | 41469 | 25933978 ~ 25940120 (+) |
| LOC110501637 | LOC106582050 | coding | upstream | 54611 | 25923432 ~ 25926978 (+) |
| LOC110501634 | LOC106582107 | coding | upstream | 67483 | 25907843 ~ 25914106 (+) |
| LOC110501629 | ppa6 | coding | upstream | 272696 | 25702896 ~ 25708893 (+) |
| LOC110501626 | LOC106582114 | coding | upstream | 285858 | 25676037 ~ 25695731 (+) |
| LOC110502075 | NA | coding | downstream | 30537 | 26031487 ~ 26035739 (+) |
| LOC110501640 | LOC106582103 | coding | downstream | 53080 | 26054030 ~ 26062493 (+) |
| LOC110501641 | LOC106582040 | coding | downstream | 106200 | 26107150 ~ 26110516 (+) |
| klhl6 | klhl6 | coding | downstream | 300189 | 26301139 ~ 26307181 (+) |
| LOC110501647 | LOC106582098 | coding | downstream | 464247 | 26465197 ~ 26498036 (+) |
| G1793183 | NA | non-coding | upstream | 27337 | 25954011 ~ 25954252 (+) |
| G1793174 | NA | non-coding | upstream | 27848 | 25940243 ~ 25953741 (+) |
| G1793136 | NA | non-coding | upstream | 71758 | 25872689 ~ 25909831 (+) |
| G1793142 | LOC100194724 | non-coding | upstream | 77535 | 25897760 ~ 25904054 (+) |
| G1793121 | LOC106582109 | non-coding | upstream | 135626 | 25843303 ~ 25845963 (+) |
| G1793265 | NA | non-coding | downstream | 69375 | 26070325 ~ 26070573 (+) |
| G1793555 | NA | non-coding | downstream | 88268 | 26089218 ~ 26089429 (+) |
| G1793595 | NA | non-coding | downstream | 121947 | 26122897 ~ 26123159 (+) |
| G1793597 | LOC106582101 | non-coding | downstream | 126848 | 26127798 ~ 26128221 (+) |
| G1793599 | NA | non-coding | downstream | 127665 | 26128615 ~ 26128943 (+) |
| G1793045 | NA | other | upstream | 249835 | 25731326 ~ 25731754 (+) |
| G1792649 | NA | other | upstream | 685032 | 25294546 ~ 25296557 (+) |
| LOC110501609 | fam155a | other | upstream | 967934 | 24848514 ~ 25013655 (+) |
| G1792040 | NA | other | upstream | 1138304 | 24842942 ~ 24843285 (+) |
| LOC110501605 | LOC106582130 | other | upstream | 1570876 | 24394068 ~ 24423067 (+) |
| G1793717 | NA | other | downstream | 314876 | 26315826 ~ 26316243 (+) |
| G1795411 | NA | other | downstream | 1902632 | 27898367 ~ 27912875 (+) |
| LOC110501693 | LOC106582057 | other | downstream | 2035978 | 28036917 ~ 28052019 (+) |
| G1795550 | NA | other | downstream | 2090615 | 28091565 ~ 28092116 (+) |
| LOC110502085 | LOC106582160 | other | downstream | 2976940 | 28977890 ~ 28984226 (+) |
