G1793597 (LOC106582101)


Basic Information

Item Value
gene id G1793597
gene name LOC106582101
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 26127798 ~ 26128221 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2052790
CTGCTGGATCACGGTGACGATGGTAACACCGGAGTTGTTGGTCGCCAGGCGATACCAGGCGTTGCGGGGGTTGAGCAGCCACTCCTCCACGTGACAGTAGTAGCGCCCCGTGTCAGCGGGCCGTGCTCCCTGGATGGTGAGactgtagaggtcagaggttGTCCTCTCAAACTGCAGACGTGAGTTAGGCCCCGCCTCCTCGGTGGGGCTACAGTTCCCGTTCCCGAACACGGCATCGTGTCCAATGGAGAACACACACAActggtcttcctcttcctcatcttcctcctcggGGCGCTCCACGTACCAGGACACGGAGAAGCGGGAGTCTCGGGAGGACTGGGAAGGGATGCTGCAGCCCAACCGGATGGAACCAGACTGGGACACAGTGATGTTAGATTCCGACTCCTCCACCTGCAACCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2052790 True 424 lncRNA 0.61 1 26127798 26128221

Neighbor

gene id symbol gene type direction distance location
LOC110501641 LOC106582040 coding upstream 17282 26107150 ~ 26110516 (+)
LOC110501640 LOC106582103 coding upstream 65305 26054030 ~ 26062493 (+)
LOC110502075 NA coding upstream 92059 26031487 ~ 26035739 (+)
LOC100301670 LOC100301670 coding upstream 187678 25933978 ~ 25940120 (+)
LOC110501637 LOC106582050 coding upstream 200820 25923432 ~ 25926978 (+)
klhl6 klhl6 coding downstream 172918 26301139 ~ 26307181 (+)
LOC110501647 LOC106582098 coding downstream 336976 26465197 ~ 26498036 (+)
LOC110501649 LOC106582097 coding downstream 389633 26517854 ~ 26524950 (+)
fancb fancb coding downstream 439534 26567755 ~ 26577035 (+)
LOC110501654 LOC106582092 coding downstream 557741 26685962 ~ 26711540 (+)
G1793595 NA non-coding upstream 4639 26122897 ~ 26123159 (+)
G1793555 NA non-coding upstream 38369 26089218 ~ 26089429 (+)
G1793265 NA non-coding upstream 57225 26070325 ~ 26070573 (+)
G1793201 NA non-coding upstream 126848 25981589 ~ 26000950 (+)
G1793214 NA non-coding upstream 129203 25998098 ~ 25998595 (+)
G1793599 NA non-coding downstream 394 26128615 ~ 26128943 (+)
G1793600 NA non-coding downstream 2200 26130421 ~ 26130699 (+)
G1793609 NA non-coding downstream 20418 26148639 ~ 26154903 (+)
G1793650 NA non-coding downstream 75959 26204180 ~ 26251807 (+)
G1793865 NA non-coding downstream 201252 26329473 ~ 26329698 (+)
G1793045 NA other upstream 396044 25731326 ~ 25731754 (+)
G1792649 NA other upstream 831241 25294546 ~ 25296557 (+)
LOC110501609 fam155a other upstream 1114143 24848514 ~ 25013655 (+)
G1792040 NA other upstream 1284513 24842942 ~ 24843285 (+)
LOC110501605 LOC106582130 other upstream 1717085 24394068 ~ 24423067 (+)
G1793717 NA other downstream 187605 26315826 ~ 26316243 (+)
G1795411 NA other downstream 1775361 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 1908707 28036917 ~ 28052019 (+)
G1795550 NA other downstream 1963344 28091565 ~ 28092116 (+)
LOC110502085 LOC106582160 other downstream 2849669 28977890 ~ 28984226 (+)

Expression


Co-expression Network