Gene
RNA
| Item | Value |
|---|---|
| gene id | G1793721 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 26129939 ~ 26130197 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2052922 | True | 259 | lncRNA | 0.41 | 1 | 26129939 | 26130197 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501639 | LOC106582104 | coding | downstream | 115964 | 26010941 ~ 26013975 (-) |
| LOC110501638 | LOC106582105 | coding | downstream | 128715 | 25945133 ~ 26001224 (-) |
| LOC110501636 | LOC100194724 | coding | downstream | 225545 | 25897760 ~ 25904394 (-) |
| LOC110501633 | LOC106582109 | coding | downstream | 238774 | 25844496 ~ 25891165 (-) |
| LOC110501632 | LOC106582041 | coding | downstream | 286972 | 25814821 ~ 25842967 (-) |
| LOC110502076 | LOC106582039 | coding | upstream | 164263 | 26294460 ~ 26299908 (-) |
| LOC110501645 | LOC106582048 | coding | upstream | 187038 | 26317235 ~ 26321085 (-) |
| LOC110501646 | LOC106582100 | coding | upstream | 258220 | 26388417 ~ 26447220 (-) |
| LOC110501648 | LOC106582099 | coding | upstream | 369406 | 26499603 ~ 26516319 (-) |
| LOC110501651 | LOC106582096 | coding | upstream | 404037 | 26534234 ~ 26567495 (-) |
| G1793720 | NA | non-coding | downstream | 169 | 26129531 ~ 26129770 (-) |
| LOC110501642 | LOC106582101 | non-coding | downstream | 3153 | 26123770 ~ 26224797 (-) |
| G1793594 | NA | non-coding | downstream | 8281 | 26121378 ~ 26121658 (-) |
| G1793593 | NA | non-coding | downstream | 9137 | 26120585 ~ 26120802 (-) |
| G1793433 | NA | non-coding | downstream | 210427 | 25919270 ~ 25919512 (-) |
| G1793842 | klhl6 | non-coding | upstream | 173187 | 26303384 ~ 26304276 (-) |
| G1793874 | NA | non-coding | upstream | 206235 | 26336432 ~ 26336659 (-) |
| G1793875 | NA | non-coding | upstream | 207493 | 26337690 ~ 26337921 (-) |
| G1793934 | NA | non-coding | upstream | 243148 | 26373345 ~ 26373547 (-) |
| G1793945 | NA | non-coding | upstream | 251081 | 26381278 ~ 26381533 (-) |
| LOC110501627 | LOC106582113 | other | downstream | 418320 | 25709599 ~ 25744218 (-) |
| G1792433 | NA | other | downstream | 1143671 | 24985959 ~ 24986268 (-) |
| G1792345 | NA | other | downstream | 1272054 | 24856824 ~ 24857885 (-) |
| G1792342 | LOC106582127 | other | downstream | 1280187 | 24848591 ~ 24849752 (-) |
| G1791405 | NA | other | downstream | 1802812 | 24326729 ~ 24327127 (-) |
| G1794978 | NA | other | upstream | 1138465 | 27268662 ~ 27286095 (-) |
| LOC110501685 | LOC106582064 | other | upstream | 1611175 | 27741372 ~ 27770708 (-) |
| G1795850 | NA | other | upstream | 1850467 | 27980664 ~ 27981379 (-) |
| LOC110501691 | LOC106582059 | other | upstream | 1879458 | 28009421 ~ 28019116 (-) |
| G1796204 | NA | other | upstream | 2204027 | 28334224 ~ 28334621 (-) |
