G1794885


Basic Information

Item Value
gene id G1794885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27147710 ~ 27148363 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2054169
ctcttggcattctctcaaacagtttcctgaggtaatcacctggaatgcatttcaattaattaacaggtgtgccttgttaaaagttaatgcatttgagccaattagttgtgttatgacaaggtacagtagggttggtatacagaagatagccctatttggaaaaAACAAAAAGTccatatggcaagaacagctcaaataagcaaagagaaacgacagtccatcattactttaagacatgaaggtcagccaatacggaacatttcaagaactttgaaagtttcttcaagtgcagtcgcaatgTGTattttccaccgtgaagcatggaggaggtggaggtgtgatagtgctttgctggtgacactgtctgtgatttattcagaattcaaggcacacataaccagcatggctaccacagcattctgcagtgataacgccatcctatctggtttgcacttcgtgggactatcatttgtttttcagcaggacaatgacccaacataactccaggctgtgtaagggctatttgaccaagaaggagagtgatggcgtgctgcatcagatgacctggtctccacaatcacctgacctcaaccaaattgagatggtttgggatgagttggactgcagagtgaaggaaaagcagccaacaagtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2054169 True 654 lncRNA 0.43 1 27147710 27148363

Neighbor

gene id symbol gene type direction distance location
LOC110501659 NA coding downstream 204482 26939760 ~ 26943228 (-)
LOC118943583 cenpj coding downstream 211026 26933520 ~ 26944274 (-)
LOC110501658 cenpj coding downstream 213864 26922840 ~ 26933846 (-)
LOC110502078 LOC106582090 coding downstream 234404 26805418 ~ 26913306 (-)
LOC110501655 LOC106582091 coding downstream 395053 26714697 ~ 26752657 (-)
LOC110501663 LOC106582084 coding upstream 966 27149329 ~ 27186838 (-)
LOC110501665 NA coding upstream 192470 27340833 ~ 27364593 (-)
LOC110502080 wars2 coding upstream 222704 27371067 ~ 27437479 (-)
LOC110501670 LOC106582076 coding upstream 344111 27492474 ~ 27498625 (-)
LOC110501672 NA coding upstream 353328 27501691 ~ 27517629 (-)
G1794884 NA non-coding downstream 1030 27145788 ~ 27146680 (-)
G1794904 NA non-coding downstream 33499 27111861 ~ 27114211 (-)
G1794748 LOC107572531 non-coding downstream 182839 26896408 ~ 26964871 (-)
G1794937 NA non-coding upstream 39051 27187414 ~ 27187624 (-)
G1794938 NA non-coding upstream 39670 27188033 ~ 27188306 (-)
G1794919 LOC106582083 non-coding upstream 44956 27193319 ~ 27193737 (-)
G1794920 LOC106582083 non-coding upstream 52953 27201316 ~ 27203100 (-)
G1794952 NA non-coding upstream 80909 27229272 ~ 27234648 (-)
LOC110501627 LOC106582113 other downstream 1436091 25709599 ~ 25744218 (-)
G1792433 NA other downstream 2161442 24985959 ~ 24986268 (-)
G1792345 NA other downstream 2289825 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 2297958 24848591 ~ 24849752 (-)
G1791405 NA other downstream 2820583 24326729 ~ 24327127 (-)
G1794978 NA other upstream 120299 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 593009 27741372 ~ 27770708 (-)
G1795850 NA other upstream 832301 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 861292 28009421 ~ 28019116 (-)
G1796204 NA other upstream 1185861 28334224 ~ 28334621 (-)

Expression


Co-expression Network