G1795591 (haox2)


Basic Information

Item Value
gene id G1795591
gene name haox2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27463145 ~ 27464838 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2054954
TTAATAGGTTGATCACACACAATGTTAATTGTTACCTTATAGGCGAGGCCCCACACGGCCGGCCTGCCGATGAACACACACTTGGCTCCCAGAGCTACAGCCTTCAGCACGTCACTACCAGTGCGGACACCACCGTCCAGATATACCTCGATCCGCCCCTGCACTGTGTCCACAATCTCAGACAGGGCATCTAtctgggtggtagagagagaaaagagcagAGGAAACTTCCTATGGAATATGAAGTATCATTTAAAACAACTGATATTCAAATCAACATTCTAtgatgtgtggacctccaaccatctttgtggtaccatttgaaagttcatatttatattgtattcccttttagtacatttatcagccaaaacatgacactcaccctgtattcaagagcatgctGTATCTAAACTGATGGCtggcacaacacaaacacatcagATTATGTAAAATAGGGTCTAGGCTAGGAAATTTAAAAAAGTATAGaacagtttgacaaccctgtttctAAGATTTTCAATGATAACAAACTCAActgtttatcttttccagtgatgaggaCACGGacgtctcatggtatggtgggtTTTTGCAAAAACCTTTGAGCACTTCTATCTCTTGAATGtgttggcattcaggtccaaaattTAACTTCTGAACACTTCTAAAATGGGCAAACATGTATGAAAAGGGGTGTGGTCaaaagtgattgaaatcaaatggaacgaCCCTGTCCTTTAAAATCAACATTTCATAAACAAAATGGTGTTTGGCTTGCTGACTGTAGGGTAAAATAGAGGCGAGATGATGATGAAGTGATATACTCTGTGCACATTCTTACTGTGGCGGGCCCTCCGTCCAGCTGGCGTCCTCCGTGGTTGGACACGATGATGCCCTGGACGCCGTGCTCCACGGCCAGCTCAGCGTCCTCCTTCGTCAGGATGCCTTTGATGATGATGGGCAGGCGGGTGAGAGACTGCAGCCAGTACACGTCCTTCCAGCTGATGGAGGGGTCCAGGGTGTTGGCAGGGACCCCATACTCCTCACCCGCAGGACCGGCAGCCTCTGGAAGACACCGTCAAAGTTCTTGACCTTGAGGTGTGGCGGGAGCTTGAACTGGTTGCGTATATCGTTGCGGCGCTTCCCGGTGTAGGGCACGTCGACAGTGAGGACCAAGGCCTTGTAGCCCAGGGCCTCCACACGGTGAATGATTGATTCAGAAAGCTTTCTGTCCCGGTACACATAGAGCTGGAACCAGCGGTAGCCGTTAGGCGCTGCAGCTGCGATCTCCTCCACAGAGCAGGTGGAGTAGGTACTGGTGATGTAACATGTGTTCACTGCCTCCgtagctg

Function

NR:

description
hydroxyacid oxidase 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2054954 True 1355 lncRNA 0.48 3 27463145 27464838

Neighbor

gene id symbol gene type direction distance location
LOC110502080 wars2 coding downstream 25666 27371067 ~ 27437479 (-)
LOC110501665 NA coding downstream 98552 27340833 ~ 27364593 (-)
LOC110501663 LOC106582084 coding downstream 276307 27149329 ~ 27186838 (-)
LOC110501659 NA coding downstream 519917 26939760 ~ 26943228 (-)
LOC118943583 cenpj coding downstream 526461 26933520 ~ 26944274 (-)
LOC110501670 LOC106582076 coding upstream 27636 27492474 ~ 27498625 (-)
LOC110501672 NA coding upstream 36853 27501691 ~ 27517629 (-)
LOC110501675 LOC106582077 coding upstream 74626 27539464 ~ 27544582 (-)
il17d il-17d coding upstream 182892 27647730 ~ 27648708 (-)
LOC110502081 ift88 coding upstream 184396 27649234 ~ 27662614 (-)
G1795582 NA non-coding downstream 13824 27449069 ~ 27449321 (-)
G1795581 NA non-coding downstream 16967 27445881 ~ 27446178 (-)
G1795580 NA non-coding downstream 17318 27445501 ~ 27445827 (-)
G1795176 NA non-coding downstream 19849 27443091 ~ 27443296 (-)
G1795163 NA non-coding downstream 29248 27433696 ~ 27433897 (-)
G1795600 NA non-coding upstream 29075 27493913 ~ 27494138 (-)
G1795601 NA non-coding upstream 29319 27494157 ~ 27494432 (-)
G1795603 NA non-coding upstream 54827 27519665 ~ 27519898 (-)
G1795632 LOC106582069 non-coding upstream 108721 27573559 ~ 27576953 (-)
G1794978 NA other downstream 177050 27268662 ~ 27286095 (-)
LOC110501627 LOC106582113 other downstream 1751526 25709599 ~ 25744218 (-)
G1792433 NA other downstream 2476877 24985959 ~ 24986268 (-)
G1792345 NA other downstream 2605260 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 2613393 24848591 ~ 24849752 (-)
LOC110501685 LOC106582064 other upstream 276534 27741372 ~ 27770708 (-)
G1795850 NA other upstream 515826 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 544817 28009421 ~ 28019116 (-)
G1796204 NA other upstream 869386 28334224 ~ 28334621 (-)
G1796239 NA other upstream 970077 28434915 ~ 28451815 (-)

Expression


Co-expression Network