G1795689



Basic Information


Item Value
gene id G1795689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27644823 ~ 27645027 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2055065
gtgaagcacccctcccagggacggtatgagagagccccagtaagccagtgactcagcccctgtaatagggttagaggcagagaatcccagtggaaagaggggaaccggccaggcggagatagcaagggcggtccgttgctccagagcctttccattcaccttcccactcctgggccagactacactcaatcacatgacccactga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2055065 True 205 lncRNA 0.58 1 27644823 27645027

Neighbor


gene id symbol gene type direction distance location
LOC110501675 LOC106582077 coding downstream 100241 27539464 ~ 27544582 (-)
LOC110501672 NA coding downstream 127194 27501691 ~ 27517629 (-)
LOC110501670 LOC106582076 coding downstream 146198 27492474 ~ 27498625 (-)
LOC110502080 wars2 coding downstream 207344 27371067 ~ 27437479 (-)
LOC110501665 NA coding downstream 280230 27340833 ~ 27364593 (-)
il17d il-17d coding upstream 2703 27647730 ~ 27648708 (-)
LOC110502081 ift88 coding upstream 4207 27649234 ~ 27662614 (-)
LOC110502082 LOC106582065 coding upstream 61904 27706931 ~ 27740630 (-)
LOC110501685 LOC106582064 coding upstream 96348 27741372 ~ 27770708 (-)
LOC110501686 LOC106582063 coding upstream 131544 27776571 ~ 27817123 (-)
G1795660 NA non-coding downstream 34423 27610003 ~ 27610400 (-)
G1795632 LOC106582069 non-coding downstream 67870 27573559 ~ 27576953 (-)
G1795603 NA non-coding downstream 124925 27519665 ~ 27519898 (-)
G1795601 NA non-coding downstream 150391 27494157 ~ 27494432 (-)
G1795703 NA non-coding upstream 30109 27675136 ~ 27675378 (-)
G1795707 NA non-coding upstream 37148 27682175 ~ 27682438 (-)
G1795708 LOC106582078 non-coding upstream 38053 27683080 ~ 27688572 (-)
acbp acbp non-coding upstream 189395 27834422 ~ 27838573 (-)
G1795771 NA non-coding upstream 219616 27864643 ~ 27865088 (-)
G1794978 NA other downstream 358728 27268662 ~ 27286095 (-)
LOC110501627 LOC106582113 other downstream 1933204 25709599 ~ 25744218 (-)
G1792433 NA other downstream 2658555 24985959 ~ 24986268 (-)
G1792345 NA other downstream 2786938 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 2795071 24848591 ~ 24849752 (-)
G1795850 NA other upstream 335637 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 364628 28009421 ~ 28019116 (-)
G1796204 NA other upstream 689197 28334224 ~ 28334621 (-)
G1796239 NA other upstream 789888 28434915 ~ 28451815 (-)

Expression



Co-expression Network