G1795771


Basic Information

Item Value
gene id G1795771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27864643 ~ 27865088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2055147
atctcttgacacaatgatggaaataatcatggcctctaaaccttcaagctgcatactggaccctattccaactaaactactgaaagagctgcttcctgtgcttggccctcctatattgaacataataaacggctctctatccaccggatgtgtaccaaactcactaaaagtggcagtaaatAAGACCTCTCTTgtaaaagccaaaccttgacccagaaaatataaaaaactatcggcctatattgaatcttccattcctctcaaaaattttagaaaaggctgttgcgcagcaactcactgccttcctgaagacaaacaatgtatacgaattgcttcagtctggttttagaccccatcatagcactgagactgcacttgtgaaggtggtaaattaccttttaatggcgtcagcccgaggctctgcatctgtccttatgcttctagac

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2055147 True 446 lncRNA 0.42 1 27864643 27865088

Neighbor

gene id symbol gene type direction distance location
acbp acbp coding downstream 26070 27834422 ~ 27838573 (-)
LOC110501686 LOC106582063 coding downstream 47520 27776571 ~ 27817123 (-)
LOC110501685 LOC106582064 coding downstream 93935 27741372 ~ 27770708 (-)
LOC110502082 LOC106582065 coding downstream 124013 27706931 ~ 27740630 (-)
LOC110502081 ift88 coding downstream 202029 27649234 ~ 27662614 (-)
LOC110501689 LOC106582060 coding upstream 38494 27903582 ~ 27912919 (-)
LOC110501691 LOC106582059 coding upstream 144333 28009421 ~ 28019116 (-)
LOC110502083 LOC101162407 coding upstream 193805 28058893 ~ 28062683 (-)
LOC110501696 LOC106582163 coding upstream 673617 28538705 ~ 28548565 (-)
trnan-guu-200 NA coding upstream 854971 28720059 ~ 28720298 (-)
G1795708 LOC106582078 non-coding downstream 176071 27683080 ~ 27688572 (-)
G1795707 NA non-coding downstream 182205 27682175 ~ 27682438 (-)
G1795703 NA non-coding downstream 189265 27675136 ~ 27675378 (-)
G1795689 NA non-coding downstream 219616 27644823 ~ 27645027 (-)
G1795777 LOC106582058 non-coding upstream 65951 27931039 ~ 27935284 (-)
G1795871 NA non-coding upstream 158650 28023738 ~ 28023937 (-)
G1795885 LOC106582057 non-coding upstream 179163 28044251 ~ 28044507 (-)
G1795896 LOC106582055 non-coding upstream 207787 28072875 ~ 28075589 (-)
G1795914 NA non-coding upstream 230341 28095429 ~ 28095647 (-)
G1794978 NA other downstream 578548 27268662 ~ 27286095 (-)
LOC110501627 LOC106582113 other downstream 2153024 25709599 ~ 25744218 (-)
G1792433 NA other downstream 2878375 24985959 ~ 24986268 (-)
G1792345 NA other downstream 3006758 24856824 ~ 24857885 (-)
G1795850 NA other upstream 115576 27980664 ~ 27981379 (-)
G1796204 NA other upstream 469136 28334224 ~ 28334621 (-)
G1796239 NA other upstream 569827 28434915 ~ 28451815 (-)
G1796401 NA other upstream 761050 28626138 ~ 28626891 (-)

Expression


Co-expression Network