G1795411


Basic Information

Item Value
gene id G1795411
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27898367 ~ 27912875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2054767
CCAATGTGACCCATATCCCCCTTTGGTCCCTGTGGTCCTGGCAGCCCAGGGGGTCCTGAACAATTAGTGGCTGCACTGTCGGGTGCACCAGCTGGTCCTTGTGGTCCAGTGGCACCATCTTCACCTTTGGGTCCTGGTTCCCCTGGTTTTCCCTTGGCACCAGTCTGGCCATCAACTCCAGGGTCTCCTTTTTGTCCTGTCTCACCTGtgtctcccttctcccccctcacACCAGTTGCCCCCCTCGCACCAGGTGGACCAATAGGTCCCTGTGGGCCTGGTGAAGCTTTGAGGAATCTGAGTGTTTTCACTGTGTCCTGAAGGAGAGTGGTGCTGGCATTGAccacacccaggtctgtcctcaGCTGGCCCAGCTGTCCATCCTCTCCACATAGGCTGCTGACCTGGGTCTGTAACCTCCCCAGGTCTCCTCTGAGAGAGTTGGACTCCAGGCTGGTGTTTCTGGCCAGTGTACGGAGGTCCTCCTCCTGGTTCATCCCCAGGGGGATGTGGATGTCGGTCAGCATCGTTGTCCTGGAGCCAGAGGAGGAGAAACAACTAGACTCCATCGAAAAGACTTTGTAAAGGAGGAAGATATTCAGTGCAGTCAGAAGGACGAGGTAAACGGCAATAACATTCAGACATCGCTGTGCTCCTCTGGCCTTGGCTGGTTTTAGATCGCTGCTCTGGAAGGTGTACATGTCCGTCCTGCTCAGTTTCATGTCCAAGTCAAGCAGTGGGTTACTCTGGTAGAACGAGCTGATGtgatcctctcctctttctactgaTGTCTCCATGTTACTCCAAAGTGACAGACAACACCCCTGAGATCCTCATCAAGACCCTCTTATAACAACGCATCATTATGTAAAAAAACATAAAACCCACCCATTTGACACAT
>TU2054765
TCTGATTTTTCACTGTTTTACTTCAAACTGATGAAACTGGTTTACAAAATGCCATTCAGTTTTTATCTGTATAAACTTTCATCCAGggtactattatattATTATAAGTTAGCTTCATGTTAGTTAAATGCCATGTTTATTGAAATGCCTATAAATGTTGTTTTAATAAGATGAGACAAAGTAGATgcatcaagtgtgtgtgtgtgtgtgtgtgtgtgtctctctctctctctatgcatctcTCCTCCAGTCTTTTTGATGGAGTCCAGGAGTCTCTCTTTTGGATCcaggacacactcacacacactgcaccccaGCGTCCTCATTGTGTTGACAATTGTTGATGCCCATGCCGTTGTGGGGGCAGTCAAACACACTGGCCTCTGTGCCTGTGCAGCGCAGGTCATCAAACCAGATCTTACCCACTCCTAAAAGAATCACAACAGAATCCACAGGCCAAGTCCAGGAGATTCAACAATGAACAATGAGCAATTCATGAATATATATAGAGTAAAACAAAACTCAACCAGGAAAGGTCCTCTATACATCCTCAGTAGGAACAAACAGACCAAACCAAATGGAAGAACTATGGAAGTGATAAGGTTCTTGGACTCACCGGGGCTTGCCGTGAAGACTGCAGAGGCTCTTTGGTACCCCAGCGTCTTGCAGAGCACCGTCCCATCCACTGTGTCGAAGCTGTCGTCACACACTGTACCCCACTGCCCCAACCAcatcacctccactctcccaCGAGCACCTCCACCAACAATACGCACATTCACTGGTCCAGCTGCTCTTTCACCCTTTTCTCCACGTGGACCTTGACTTCCAGGACTTCCCTGCAACCCTGGAAGACcaGCAAGTCCTCTTGTTCCATTAACACCAGCAGGTCCTCTTGGTCCTTCAGGTCCTATGGGTCCAGGCTCTCCTGTCAGCCCTGTGTTACCCTTCAGACCACGGGCCCCTTTTACTCCATCACGCCCCTGAACTCCAGTGTCCCCTTTGGTTCCGTTCTGGCCTGATATCCCTGGTAAACCAATGTGTCCCATATCCCCCTTTGGTCCCTGTGGTCCTGGCAGCCCAGGGGGTCCTGAACAATTAGTGGCTGCACTGTCGGGTGCACCAGCTGGTCCTTGTGGTCCAGTGGCACCATCTTCACCTTTGGGTCCTGGTTCCCCTGGTTTTCCCTTGGCACCAGTCTGGCCATCAACTCCAGGGTCTCCTTTTTGTCCTGTCTCACCTGtgtctcccttctcccccctcacACCAGTTGCCCCCCTCGCACCAGGTGGACCAATAGGTCCCTGTGGGCCTGGTGAAGCTTTGAGGAATCTGAGTGTTTTCACTGTGTCCTGAAGGAGAGTGGTGCTGGCATTGAccacacccaggtctgtcctcaGCTGGCCCAGCTGTCCATCCTCTCCACATAGGCTGCTGACCTGGGTCTGTAACCTCCCCAGGTCTCCTCTGAGAGAGTTGGACTCCAGGCTGGTGTTTCTGGCCAGTGTACGGAGGTCCTCCTCCTGGTTCATCCCCAGGGGGATGTGGATGTCGGTCAGCATCGTTGTCCTGGAGCCAGAGGAGGAGAAACAACTAGACTCCATCGAAAAGACTTTGTAAAGGAGGAAGATATTCAGTGCAGTCAGAAGGACGAGGTAAACGGCAATAACATTCAGACATCGCTGTGCTCCTCTGGCCTTGGCTGGTTTTAGATCGCTGCTCTGGAAGGTGTACATGTCCGTCCTGCTCAGTTTCATGTCCAAGTCAAGCAGTGGGTTACTCTGGTAGAACGAGCTGATGtgatcctctcctctttctactgaTGTCTCCATGTTACTCCAAAGTGACAGACAACACCCCTGAGATCCTCATCAAGACCCTCTTATAACAACGCATCATTATGTAAAAAAACATAAAACCCACCCATTTGACACAT

Function

NR:

description
macrophage receptor MARCO-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2054767 False 901 lncRNA 0.53 8 27898367 27912875
TU2054765 True 1936 TUCP 0.50 14 27903582 27912875

Neighbor

gene id symbol gene type direction distance location
LOC110501688 LOC106582045 coding upstream 15467 27880850 ~ 27882900 (+)
LOC110502120 sctr coding upstream 70773 27799755 ~ 27827594 (+)
trnaa-ugc-173 NA coding upstream 153006 27745286 ~ 27745361 (+)
LOC110501682 LOC106582074 coding upstream 201982 27688732 ~ 27696385 (+)
LOC110501683 LOC106582078 coding upstream 209793 27685606 ~ 27688574 (+)
LOC110501690 LOC106582058 coding downstream 18077 27930952 ~ 27935316 (+)
ccdc93 ccdc93 coding downstream 115587 28028462 ~ 28036764 (+)
LOC110501693 LOC106582057 coding downstream 124042 28036917 ~ 28052019 (+)
LOC110501694 LOC106582055 coding downstream 159545 28072420 ~ 28076571 (+)
LOC110502084 NA coding downstream 323345 28236220 ~ 28400108 (+)
G1795358 NA non-coding upstream 63061 27834522 ~ 27835306 (+)
G1795356 NA non-coding upstream 132308 27763426 ~ 27766059 (+)
G1795348 NA non-coding upstream 144712 27751970 ~ 27753655 (+)
G1795343 NA non-coding upstream 154230 27743684 ~ 27744137 (+)
G1795476 NA non-coding downstream 67256 27980131 ~ 27980376 (+)
G1795484 NA non-coding downstream 74543 27987418 ~ 27988471 (+)
G1795519 NA non-coding downstream 130474 28043349 ~ 28043675 (+)
G1795544 NA non-coding downstream 174507 28087382 ~ 28087586 (+)
G1795546 NA non-coding downstream 175304 28088179 ~ 28088401 (+)
G1793717 NA other upstream 1582124 26315826 ~ 26316243 (+)
G1793045 NA other upstream 2166613 25731326 ~ 25731754 (+)
G1792649 NA other upstream 2601810 25294546 ~ 25296557 (+)
LOC110501609 fam155a other upstream 2884712 24848514 ~ 25013655 (+)
G1792040 NA other upstream 3055082 24842942 ~ 24843285 (+)
G1795550 NA other downstream 178690 28091565 ~ 28092116 (+)
LOC110502085 LOC106582160 other downstream 1065015 28977890 ~ 28984226 (+)
LOC110501700 LOC106582186 other downstream 1095749 28997763 ~ 29010281 (+)
G1797582 NA other downstream 1831317 29744192 ~ 29744854 (+)

Expression


Co-expression Network