G1795544


Basic Information

Item Value
gene id G1795544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28087382 ~ 28087586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2054907
ATGTACCATACTGTCAATTGAGTCTGTTGCAGTATAGCAGGGCAGCGTTTAAGTAATACGCTATAACCTTGCTATAGGAGTTGAGAGGAATTTCTTTGTCATTATTTGGGTCTGAGTGACAAACAGAATCAGAATCAATCTCACAGTTTGTCATCCGAGTCCATTGTGTCCGGGTTAGGACAAAGAGAAGTGCCAATTTGTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2054907 True 205 lncRNA 0.41 1 28087382 28087586

Neighbor

gene id symbol gene type direction distance location
LOC110501694 LOC106582055 coding upstream 10811 28072420 ~ 28076571 (+)
LOC110501693 LOC106582057 coding upstream 35363 28036917 ~ 28052019 (+)
ccdc93 ccdc93 coding upstream 50618 28028462 ~ 28036764 (+)
LOC110501690 LOC106582058 coding upstream 152066 27930952 ~ 27935316 (+)
LOC110501688 LOC106582045 coding upstream 204482 27880850 ~ 27882900 (+)
LOC110502084 NA coding downstream 148634 28236220 ~ 28400108 (+)
trnaa-ugc-174 NA coding downstream 202639 28290225 ~ 28290297 (+)
LOC110501697 LOC106582162 coding downstream 614281 28701867 ~ 28702664 (+)
epha6 LOC106582188 coding downstream 668204 28755790 ~ 28976739 (+)
LOC110502085 LOC106582160 coding downstream 892632 28977890 ~ 28984226 (+)
G1795519 NA non-coding upstream 43707 28043349 ~ 28043675 (+)
G1795484 NA non-coding upstream 98911 27987418 ~ 27988471 (+)
G1795476 NA non-coding upstream 107006 27980131 ~ 27980376 (+)
G1795411 NA non-coding upstream 174507 27898367 ~ 27912875 (+)
G1795358 NA non-coding upstream 252076 27834522 ~ 27835306 (+)
G1795546 NA non-coding downstream 593 28088179 ~ 28088401 (+)
G1795549 NA non-coding downstream 3436 28091022 ~ 28091293 (+)
G1795949 NA non-coding downstream 60638 28148224 ~ 28156995 (+)
G1795967 NA non-coding downstream 100643 28188229 ~ 28188523 (+)
G1795973 NA non-coding downstream 105232 28192818 ~ 28193050 (+)
G1793717 NA other upstream 1771139 26315826 ~ 26316243 (+)
G1793045 NA other upstream 2355628 25731326 ~ 25731754 (+)
G1792649 NA other upstream 2790825 25294546 ~ 25296557 (+)
G1795550 NA other downstream 3979 28091565 ~ 28092116 (+)
LOC110501700 LOC106582186 other downstream 921038 28997763 ~ 29010281 (+)
G1797582 NA other downstream 1656606 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 1835971 29917773 ~ 29933035 (+)

Expression


Co-expression Network