G1796376


Basic Information

Item Value
gene id G1796376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28606304 ~ 28607422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2055817
attggccataagagactacattttccagaggtccgcccggtgtcctttgtctaaatttgtgcgtaatcttcaggtgcaggcattttctcctgggattcaggagagaaagcatgtttccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgaggattgattctaaaccagtttgccatgttttcagtcgatattatggagttaatttggaaaaaagtttgcgttttgaggactgaatttatggatttcttttggtagccaaatgtgatgtataaaacggagctatttctaatacacaaggaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttaatgttgcgtgctggatgctaacgctaatgctaacgctaaatgctaacgcgaaatgctaactctagctagctacttttacacaaatgattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagcttgagagatggcatatttatttcatttcatttgcgattttcataaatagttaacgttgtgttatgctaatgagcttgctgatagatttacacaatcctggatacaggggttttttcatagctaaacgtgacgcagaaaatggagcgatttgtcctaaacaaataatctttcaggaaaaactgaacatttgctatctgagagtctcctcaatgaaaacatctgaagttcttcaaaggtaaatgatttttttgaatgcttttctgtttttttgtgtaaatgttgccagctgaatgctaatgctaaatgctacgttagccatcaatactgttacacaaattattgttttgcaatggttgagaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctaagcttgagagctagcatatttatttcatttcatttgcgattttcatgaatagttaacgttgcgttatggtaatgagcttgagtctgtattcacgaacccggatccgggatggggagatcagaaaggttaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2055817 True 1119 lncRNA 0.36 1 28606304 28607422

Neighbor

gene id symbol gene type direction distance location
LOC110501696 LOC106582163 coding downstream 57739 28538705 ~ 28548565 (-)
LOC110502083 LOC101162407 coding downstream 543621 28058893 ~ 28062683 (-)
LOC110501691 LOC106582059 coding downstream 587188 28009421 ~ 28019116 (-)
LOC110501689 LOC106582060 coding downstream 693385 27903582 ~ 27912919 (-)
acbp acbp coding downstream 767731 27834422 ~ 27838573 (-)
trnan-guu-200 NA coding upstream 112637 28720059 ~ 28720298 (-)
LOC110501699 NA coding upstream 211908 28819330 ~ 28826708 (-)
LOC118943585 NA coding upstream 716723 29324145 ~ 29325269 (-)
LOC110501708 LOC106582177 coding upstream 826130 29433552 ~ 29441071 (-)
dnajc15 dcj15 coding upstream 998641 29606063 ~ 29619908 (-)
G1796363 NA non-coding downstream 8607 28597490 ~ 28597697 (-)
G1796328 NA non-coding downstream 21522 28565325 ~ 28584782 (-)
G1796302 NA non-coding downstream 54196 28551865 ~ 28552108 (-)
G1796297 NA non-coding downstream 68800 28537079 ~ 28537504 (-)
G1796264 NA non-coding downstream 94547 28511294 ~ 28511757 (-)
G1796377 NA non-coding upstream 471 28607893 ~ 28608240 (-)
G1796384 LOC105896813 non-coding upstream 4323 28611745 ~ 28612089 (-)
G1796418 NA non-coding upstream 37649 28645071 ~ 28645297 (-)
G1796431 NA non-coding upstream 47794 28655216 ~ 28655542 (-)
G1796435 NA non-coding upstream 49836 28657258 ~ 28657479 (-)
G1796239 NA other downstream 167533 28434915 ~ 28451815 (-)
G1796204 NA other downstream 271683 28334224 ~ 28334621 (-)
G1795850 NA other downstream 624925 27980664 ~ 27981379 (-)
LOC110501685 LOC106582064 other downstream 862705 27741372 ~ 27770708 (-)
G1796401 NA other upstream 18716 28626138 ~ 28626891 (-)
G1797146 LOC106582182 other upstream 604242 29211664 ~ 29243649 (-)
G1797556 NA other upstream 1052045 29659467 ~ 29660947 (-)
LOC110501714 LOC106582170 other upstream 1230855 29835498 ~ 29846456 (-)

Expression


Co-expression Network