G1796418



Basic Information


Item Value
gene id G1796418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28645071 ~ 28645297 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2055859
gatttggaccgcagagtgaaagaaaatcagccaagtgctcagcatatgtgggaactccttcaagatggttggaaaaacattccttatgaagctgattgagagaataccaagagtgtgcaaagctgtcatcaaggcaaacggtggctactttgaagaatctcaaatatattttgatttgtttaacacttttttggttactacatgattccatatgtgttattaaatag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2055859 True 227 lncRNA 0.37 1 28645071 28645297

Neighbor


gene id symbol gene type direction distance location
LOC110501696 LOC106582163 coding downstream 96506 28538705 ~ 28548565 (-)
LOC110502083 LOC101162407 coding downstream 582388 28058893 ~ 28062683 (-)
LOC110501691 LOC106582059 coding downstream 625955 28009421 ~ 28019116 (-)
LOC110501689 LOC106582060 coding downstream 732152 27903582 ~ 27912919 (-)
acbp acbp coding downstream 806498 27834422 ~ 27838573 (-)
trnan-guu-200 NA coding upstream 74762 28720059 ~ 28720298 (-)
LOC110501699 NA coding upstream 174033 28819330 ~ 28826708 (-)
LOC118943585 NA coding upstream 678848 29324145 ~ 29325269 (-)
LOC110501708 LOC106582177 coding upstream 788255 29433552 ~ 29441071 (-)
dnajc15 dcj15 coding upstream 960766 29606063 ~ 29619908 (-)
G1796384 LOC105896813 non-coding downstream 32982 28611745 ~ 28612089 (-)
G1796377 NA non-coding downstream 36831 28607893 ~ 28608240 (-)
G1796376 NA non-coding downstream 37649 28606304 ~ 28607422 (-)
G1796363 NA non-coding downstream 47374 28597490 ~ 28597697 (-)
G1796328 NA non-coding downstream 60289 28565325 ~ 28584782 (-)
G1796431 NA non-coding upstream 9919 28655216 ~ 28655542 (-)
G1796435 NA non-coding upstream 11961 28657258 ~ 28657479 (-)
G1796451 NA non-coding upstream 20464 28665761 ~ 28666014 (-)
G1796481 LOC106582162 non-coding upstream 56635 28701932 ~ 28702757 (-)
G1796489 NA non-coding upstream 61260 28706557 ~ 28706780 (-)
G1796401 NA other downstream 18180 28626138 ~ 28626891 (-)
G1796239 NA other downstream 206300 28434915 ~ 28451815 (-)
G1796204 NA other downstream 310450 28334224 ~ 28334621 (-)
G1795850 NA other downstream 663692 27980664 ~ 27981379 (-)
G1797146 LOC106582182 other upstream 566367 29211664 ~ 29243649 (-)
G1797556 NA other upstream 1014170 29659467 ~ 29660947 (-)
LOC110501714 LOC106582170 other upstream 1192980 29835498 ~ 29846456 (-)
G1797936 NA other upstream 1326261 29971558 ~ 29978535 (-)

Expression



Co-expression Network