G1796500


Basic Information

Item Value
gene id G1796500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28712202 ~ 28712508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2055941
acctacatcactaccactgttttcacctacatcactaccactgttttcacctacatcactaccactgttttcacctacatcactaccactgttttcacctacatcactgccactgttttcacctacatcactaccactgttttcacctacatcactGCCACTGTTTACACCTACATCACTGCCACTGTTTACACCTACATCACTgccactgttttcacctacatcactactactgttttcacctacatcactaccactgttttcacctacatcactaccactgttttcacctacatcactactactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2055941 True 307 lncRNA 0.43 1 28712202 28712508

Neighbor

gene id symbol gene type direction distance location
LOC110501697 LOC106582162 coding upstream 9538 28701867 ~ 28702664 (+)
LOC110502084 NA coding upstream 315852 28236220 ~ 28400108 (+)
trnaa-ugc-174 NA coding upstream 421905 28290225 ~ 28290297 (+)
LOC110501694 LOC106582055 coding upstream 635631 28072420 ~ 28076571 (+)
LOC110501693 LOC106582057 coding upstream 660183 28036917 ~ 28052019 (+)
epha6 LOC106582188 coding downstream 43282 28755790 ~ 28976739 (+)
LOC110502085 LOC106582160 coding downstream 267710 28977890 ~ 28984226 (+)
LOC110502121 cld14 coding downstream 280825 28993333 ~ 28994549 (+)
LOC110501700 LOC106582186 coding downstream 285255 28997763 ~ 29010281 (+)
LOC110501701 LOC106586531 coding downstream 351131 29063639 ~ 29094498 (+)
G1796461 NA non-coding upstream 39081 28672918 ~ 28673121 (+)
G1796440 NA non-coding upstream 52366 28659598 ~ 28659836 (+)
G1796436 NA non-coding upstream 53928 28658045 ~ 28658274 (+)
G1796412 NA non-coding upstream 70005 28641899 ~ 28642197 (+)
G1796405 NA non-coding upstream 77756 28634028 ~ 28634446 (+)
G1796503 NA non-coding downstream 2519 28715027 ~ 28715304 (+)
G1796505 NA non-coding downstream 4556 28717064 ~ 28717353 (+)
G1796520 NA non-coding downstream 24487 28736995 ~ 28737221 (+)
G1796537 NA non-coding downstream 37276 28749784 ~ 28749986 (+)
G1796555 NA non-coding downstream 48226 28760734 ~ 28765709 (+)
G1795550 NA other upstream 620086 28091565 ~ 28092116 (+)
G1795411 NA other upstream 799327 27898367 ~ 27912875 (+)
G1793717 NA other upstream 2395959 26315826 ~ 26316243 (+)
G1793045 NA other upstream 2980448 25731326 ~ 25731754 (+)
G1797582 NA other downstream 1031684 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 1211049 29917773 ~ 29933035 (+)
G1798168 NA other downstream 1788148 30500656 ~ 30545954 (+)

Expression


Co-expression Network