G1796573


Basic Information

Item Value
gene id G1796573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28801790 ~ 28802015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056027
gagttaactctgggttttcctttcctgtgacggtcctcatgagagacagtttcatcatatgtcttgatggtttttgcgactgcacttgaagaaatgttaaaagttattgaaatgttccgtattgactgaccttcatgtcttaaagtaatgatggactgttgtttctctttattctattctattcttgccatagtatggactccaaatagggctatcttctctatac

Function

NR:

description
hypothetical protein EH28_19535

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056027 True 226 lncRNA 0.37 1 28801790 28802015

Neighbor

gene id symbol gene type direction distance location
LOC110501697 LOC106582162 coding upstream 99126 28701867 ~ 28702664 (+)
LOC110502084 NA coding upstream 405440 28236220 ~ 28400108 (+)
trnaa-ugc-174 NA coding upstream 511493 28290225 ~ 28290297 (+)
LOC110501694 LOC106582055 coding upstream 725219 28072420 ~ 28076571 (+)
LOC110501693 LOC106582057 coding upstream 749771 28036917 ~ 28052019 (+)
LOC110502085 LOC106582160 coding downstream 178203 28977890 ~ 28984226 (+)
LOC110502121 cld14 coding downstream 191318 28993333 ~ 28994549 (+)
LOC110501700 LOC106582186 coding downstream 195748 28997763 ~ 29010281 (+)
LOC110501701 LOC106586531 coding downstream 261624 29063639 ~ 29094498 (+)
LOC110501702 LOC106582183 coding downstream 300098 29102113 ~ 29167753 (+)
G1796567 NA non-coding upstream 9746 28791604 ~ 28792044 (+)
G1796555 NA non-coding upstream 36081 28760734 ~ 28765709 (+)
G1796537 NA non-coding upstream 51804 28749784 ~ 28749986 (+)
G1796520 NA non-coding upstream 64569 28736995 ~ 28737221 (+)
G1796505 NA non-coding upstream 84437 28717064 ~ 28717353 (+)
G1796574 NA non-coding downstream 1765 28803780 ~ 28804127 (+)
G1796578 NA non-coding downstream 13581 28815596 ~ 28815851 (+)
G1796615 NA non-coding downstream 61672 28863687 ~ 28864346 (+)
G1796616 NA non-coding downstream 62998 28865013 ~ 28865248 (+)
G1796619 NA non-coding downstream 69572 28871587 ~ 28871862 (+)
G1795550 NA other upstream 709674 28091565 ~ 28092116 (+)
G1795411 NA other upstream 888915 27898367 ~ 27912875 (+)
G1793717 NA other upstream 2485547 26315826 ~ 26316243 (+)
G1793045 NA other upstream 3070036 25731326 ~ 25731754 (+)
G1797582 NA other downstream 942177 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 1121542 29917773 ~ 29933035 (+)
G1798168 NA other downstream 1698641 30500656 ~ 30545954 (+)

Expression


Co-expression Network